@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3433c: (2016-05-20 )
MRHYYSVDTIRAAEAPLLASLPDGALMRRAAFGLATEIGRELTARTGGVVGRRVCAVVGSGDNGGDALWAATFLRRRGAAADAVLLNPDRTHRKALAAFTKSGGRLVESVSAATDLVIDGVVGISGSGPLRPAAAQVFAAVQAAAIPVVAVDIPSGIDVATGAITGPAVHAALTVTFGGLKPVHALADCGRVVLVDIGLDLAHTDVLGFEATDVAARWPVPGPRDDKYTQGVTGVLAGSSTYPGAAVLCTGAAVAATSGMVRYAGTAHAEVLAHWPEVIASPTPAAAGRVQAWVVGPGLGTDEAGAAALWFALDTDLPVLVDADGLTMLADHPDLVAGRNAPTVLTPHAGEFARLAGAPPGDDRVGACRQLADALGATVLLKGNVTVIADPGGPVYLNPAGQSWAATAGSGDVLSGMIGALLASGLPSGEAAAAAAFVHARASAAAAADPGPGDAPTSASRISGHIRAALAAL

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

B4P_A_3(3RQX)
NNRD_BACSU
[Raw transfer]



AP5_A_3(3RQ8)
NNRD_BACSU
[Raw transfer]



APR_A_3(3RQ6)
NNRD_BACSU
[Raw transfer]



APR_A_6(3RS8)
NNR_THEMA
[Raw transfer]



B6P_A_3(3RQH)
NNRD_BACSU
[Raw transfer]



ATP_A_6(3RTE)
NNR_THEMA
[Raw transfer]



BA3_A_3(3RQQ)
NNRD_BACSU
[Raw transfer]



APR_A_6(3RSG)
NNR_THEMA
[Raw transfer]



NPW_A_7(3RU3)
NNR_THEMA
[Raw transfer]



NAX_A_7(3RTD)
NNR_THEMA
[Raw transfer]



AMP_A_3(3RQ2)
NNRD_BACSU
[Raw transfer]



COA_A_2(3RQ5)
NNRD_BACSU
[Raw transfer]



NPW_A_4(3RPZ)
NNRD_BACSU
[Raw transfer]



NAX_A_5(3RSQ)
NNR_THEMA
[Raw transfer]



NPW_A_4(3RPZ)
NNRD_BACSU
[Raw transfer]



NAX_A_4(3RQ2)
NNRD_BACSU
[Raw transfer]



EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]



NPW_A_5(3RU2)
NNR_THEMA
[Raw transfer]



NAD_A_7(3RSG)
NNR_THEMA
[Raw transfer]



NAP_A_7(3RTE)
NNR_THEMA
[Raw transfer]



AMP_A_5(3RPH)
NNRD_BACSU
[Raw transfer]



ADP_A_7(3RRE)
NNR_THEMA
[Raw transfer]
32 HHSearch 97.8729%-108 * C3 *3RSS - NNR_THEMA -
7 PsiBlast_PDB 85.0830%-105 - C3 -3RT9 - NNR_THEMA -
3 PsiBlast_PDB 85.0230%-106 - C3 -3RSF - NNR_THEMA -
1 PsiBlast_PDB 84.9630%-103 - C3 -3RS8 6.7 NNR_THEMA
14 PsiBlast_PDB 84.8930%-103 - C3 -3RRB - NNR_THEMA -
5 PsiBlast_PDB 84.7130%-105 - C3 -3RSS - NNR_THEMA -
19 PsiBlast_PDB 84.6730%-104 - C3 -3RTB - NNR_THEMA -
16 PsiBlast_PDB 84.6130%-104 - C3 -3RRF - NNR_THEMA -
10 PsiBlast_PDB 84.5230%-104 - C3 -3RTD 5.6 NNR_THEMA
8 PsiBlast_PDB 84.5230%-105 - C3 -3RTA - NNR_THEMA -
12 PsiBlast_PDB 84.5130%-104 - C3 -3RTG - NNR_THEMA -
18 PsiBlast_PDB 84.4730%-103 - C3 -3RSG 6.1 NNR_THEMA
4 PsiBlast_PDB 84.3630%-105 - C3 -3RSQ 5.7 NNR_THEMA
2 PsiBlast_PDB 84.3130%-105 - C3 -3RS9 - NNR_THEMA -
6 PsiBlast_PDB 84.2930%-103 - C3 -3RT7 - NNR_THEMA -
11 PsiBlast_PDB 84.2630%-105 - C3 -3RTE 6.5 NNR_THEMA
17 PsiBlast_PDB 84.1930%-106 - C3 -3RRJ - NNR_THEMA -
15 PsiBlast_PDB 84.1830%-105 - C3 -3RRE 3.8 NNR_THEMA
9 PsiBlast_PDB 83.9030%-105 - C3 -3RTC - NNR_THEMA -
20 PsiBlast_PDB 83.4830%-105 - C3 -3RU2 5.4 NNR_THEMA
13 PsiBlast_PDB 83.4130%-102 - C3 -3RU3 6.3 NNR_THEMA
40 HHSearch 69.9330% -94 - C3 -3RPZ 5.7 NNRD_BACSU
25 PsiBlast_CBE 56.9436% -98 - C3 -3RQ6 6.4 NNRD_BACSU
22 PsiBlast_CBE 56.6836%-101 - C3 -3RQQ 6.4 NNRD_BACSU
24 PsiBlast_CBE 56.5336% -98 - C3 -3RQ8 7.3 NNRD_BACSU
27 PsiBlast_CBE 56.0936%-100 - C3 -3RQ2 5.7 NNRD_BACSU
29 PsiBlast_CBE 55.9936%-101 - C3 -3RPH 4.2 NNRD_BACSU
26 PsiBlast_CBE 55.9336%-100 - C3 -3RQ5 5.2 NNRD_BACSU
23 PsiBlast_CBE 55.9236%-100 - C3 -3RQH 6.3 NNRD_BACSU
28 PsiBlast_CBE 55.7636%-101 - C3 -3RPZ 5.7 NNRD_BACSU
21 PsiBlast_CBE 55.4536%-101 - C3 -3RQX 8.9 NNRD_BACSU