@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3464: (2016-05-20 )
MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADVEDAIRLVQGDITDAELVSQLVAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRILDRGRIGRTYLISSEGERDNLTVLRTLLRLMDRDPDDFDHVTDRVGHDLRYAIDPSTLYDELCWAPKHTDFEEGLRTTIDWYRDNESWWRPLKDATEARYQERGQ

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAU_F_6(1KER)
?
[Raw transfer]




DAU_G_7(1KER)
?
[Raw transfer]




NAD_H_8(1KER)
?
[Raw transfer]




NAD_A_4(1OC2)
?
[Raw transfer]




NAD_A_4(1OC2)
?
[Raw transfer]




NAD_F_6(1KEP)
RMLB_STRMU
[Raw transfer]




NAD_A_2(1R6D)
?
[Raw transfer]




NAD_A_2(1R6D)
?
[Raw transfer]




NAD_G_7(1KEP)
RMLB_STRMU
[Raw transfer]




NAD_B_8(1OC2)
?
[Raw transfer]




NAD_A_3(1R66)
?
[Raw transfer]




NAD_E_5(1KET)
RMLB_STRMU
[Raw transfer]




NAD_F_6(1KEU)
RMLB_SALTY
[Raw transfer]




NAD_F_6(1KET)
RMLB_STRMU
[Raw transfer]




NAD_C_3(2HUN)
?
[Raw transfer]




NAD_E_5(1KEW)
RMLB_SALTY
[Raw transfer]




NAD_I_9(1KER)
?
[Raw transfer]




NAD_E_5(1KEU)
RMLB_SALTY
[Raw transfer]




NAD_F_6(1KEW)
RMLB_SALTY
[Raw transfer]




NAD_E_5(1KEW)
RMLB_SALTY
[Raw transfer]




NAD_C_3(2HUN)
?
[Raw transfer]




NAD_D_4(2HUN)
?
[Raw transfer]




NAD_B_4(1BXK)
RMLB2_ECOLI
[Raw transfer]




NAD_A_3(1BXK)
RMLB2_ECOLI
[Raw transfer]




48 HHSearch 94.3161% -73 - C1 -1OC2 12.1 ?
4 PsiBlast_PDB 93.3060% -74 - C1 -1OC2 12.1 ?
2 PsiBlast_PDB 92.8260% -74 - C1 -1KER 12.5 ?
1 PsiBlast_PDB 92.5260% -75 - C1 -1KEP 12.6 RMLB_STRMU
21 PsiBlast_CBE 92.5160% -75 - C1 -1OC2 12.2 ?
24 PsiBlast_CBE 92.3960% -76 - C1 -1KEP 12.3 RMLB_STRMU
3 PsiBlast_PDB 91.9860% -76 - C1 -1KET 12.5 RMLB_STRMU
23 PsiBlast_CBE 91.9260% -76 - C1 -1KER 12.6 ?
22 PsiBlast_CBE 91.8860% -75 - C1 -1KET 12.3 RMLB_STRMU
5 PsiBlast_PDB 87.4750% -83 - C1 -2HUN 10.2 ?
7 PsiBlast_PDB 84.9446% -81 - C1 -1BXK 11.4 RMLB2_ECOLI
49 HHSearch 84.6749% -83 - C1 -2HUN 10.2 ?
25 PsiBlast_CBE 84.2550% -79 - C1 -2HUN 10.6 ?
50 HHSearch 84.0047% -78 - C1 -1R6D 12.7 ?
26 PsiBlast_CBE 82.1646% -77 - C1 -1BXK 11.6 RMLB2_ECOLI
8 PsiBlast_PDB 82.0948% -76 - C1 -1R66 12.6 ?
47 HHSearch 80.9847% -79 - C1 -4EGB - ? -
9 PsiBlast_PDB 80.9247% -75 - C1 -1R6D 12.7 ?
57 HHSearch 80.5745% -77 - C1 -1KEW 12.6 RMLB_SALTY
6 PsiBlast_PDB 80.2446% -80 - C1 -4EGB - ? -
11 PsiBlast_PDB 79.9042% -71 - C1 -1KEU 12.2 RMLB_SALTY
12 PsiBlast_PDB 79.8942% -72 - C1 -1KEW 12.6 RMLB_SALTY
27 PsiBlast_CBE 78.8942% -71 - C1 -1KEW 12.5 RMLB_SALTY
28 PsiBlast_CBE 78.3542% -71 - C1 -1KEU 12.2 RMLB_SALTY