@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3465: (2016-05-20 )
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_D_19(4HN0)
CHMJ_STRBI
[Raw transfer]




EDO_B_10(4HN0)
CHMJ_STRBI
[Raw transfer]




EDO_C_16(4HN0)
CHMJ_STRBI
[Raw transfer]




TRH_A_5(2IXC)
RMLC_MYCTU
[Raw transfer]




TRH_D_8(2IXC)
RMLC_MYCTU
[Raw transfer]




TRH_B_6(2IXC)
RMLC_MYCTU
[Raw transfer]




TRH_C_7(2IXC)
RMLC_MYCTU
[Raw transfer]




TDO_B_4(2IXK)
RMLC_PSEAE
[Raw transfer]




TDO_A_3(2IXK)
RMLC_PSEAE
[Raw transfer]




TDO_A_3(2IXK)
RMLC_PSEAE
[Raw transfer]




18T_A_7(4HMZ)
CHMJ_STRBI
[Raw transfer]




18T_D_15(4HMZ)
CHMJ_STRBI
[Raw transfer]




18T_C_11(4HMZ)
CHMJ_STRBI
[Raw transfer]




TRH_A_3(2IXH)
RMLC_PSEAE
[Raw transfer]




18T_B_8(4HMZ)
CHMJ_STRBI
[Raw transfer]




TRH_B_4(2IXH)
RMLC_PSEAE
[Raw transfer]




GOL_B_6(1OFN)
?
[Raw transfer]




ATY_D_6(1DZT)
RMLC_SALTY
[Raw transfer]




GOL_A_7(1DZR)
RMLC_SALTY
[Raw transfer]




GOL_A_7(1DZR)
RMLC_SALTY
[Raw transfer]




GOL_A_7(1DZR)
RMLC_SALTY
[Raw transfer]




GOL_A_7(1DZR)
RMLC_SALTY
[Raw transfer]




TYD_A_4(3RYK)
?
[Raw transfer]




SRT_C_3(1RTV)
RMLC_PSEAE
[Raw transfer]




TYD_B_14(4HN1)
CHMJ_STRBI
[Raw transfer]




TYD_C_19(4HN1)
CHMJ_STRBI
[Raw transfer]




TYD_C_18(4HN1)
CHMJ_STRBI
[Raw transfer]




TYD_A_9(4HN1)
CHMJ_STRBI
[Raw transfer]




TPE_D_5(1DZT)
RMLC_SALTY
[Raw transfer]




TYD_A_9(4HN1)
CHMJ_STRBI
[Raw transfer]




SRT_A_3(2IXJ)
RMLC_PSEAE
[Raw transfer]




GOL_A_3(1OFN)
?
[Raw transfer]




TYD_A_3(2IXI)
RMLC_PSEAE
[Raw transfer]




SRT_A_4(2IXI)
RMLC_PSEAE
[Raw transfer]




TYD_C_3(1EPZ)
RMLC_METTH
[Raw transfer]




TYD_B_5(2IXI)
RMLC_PSEAE
[Raw transfer]




TMP_A_3(1OI6)
?
[Raw transfer]




POP_A_3(3RYK)
?
[Raw transfer]




POP_A_3(3RYK)
?
[Raw transfer]




TMP_B_4(1OI6)
?
[Raw transfer]




TMP_A_3(1OI6)
?
[Raw transfer]




EDO_A_7(4HN0)
CHMJ_STRBI
[Raw transfer]




EDO_B_12(4HN0)
CHMJ_STRBI
[Raw transfer]




22 PsiBlast_CBE 98.46100%-108 - C3 -2IXC 5.7 RMLC_MYCTU
23 PsiBlast_CBE 98.06100%-110 - C3 -2IXC 5.5 RMLC_MYCTU
2 PsiBlast_PDB 97.87100%-109 - C3 -2IXC 5.9 RMLC_MYCTU
21 PsiBlast_CBE 97.70100%-107 - C3 -2IXC 6.0 RMLC_MYCTU
1 PsiBlast_PDB 97.43100%-112 - C3 -1PM7 - RMLC_MYCTU -
24 PsiBlast_CBE 97.05100%-108 - C3 -1PM7 - RMLC_MYCTU -
65 HHSearch 88.22100% -87 - C- -1UPI - RMLC_MYCTU -
3 PsiBlast_PDB 87.9999% -87 - C- -1UPI - RMLC_MYCTU -
4 PsiBlast_PDB 81.1748%-102 - C3 -2C0Z - NOVW_STRNV -
67 HHSearch 80.8148%-100 - C3 -2C0Z - NOVW_STRNV -
33 PsiBlast_CBE 78.7646%-106 - C3 -4HN1 2.5 CHMJ_STRBI
27 PsiBlast_CBE 78.6847%-107 - C3 -4HN0 2.8 CHMJ_STRBI
5 PsiBlast_PDB 78.5047%-108 - C3 -4HN0 3.0 CHMJ_STRBI
66 HHSearch 78.4844% -93 - C3 -4HN1 2.6 CHMJ_STRBI
10 PsiBlast_PDB 78.3142% -96 - C3 -1WA4 - ? -
29 PsiBlast_CBE 78.2647%-106 - C3 -4HMZ 4.8 CHMJ_STRBI
34 PsiBlast_CBE 78.1342% -96 - C3 -1OI6 3.9 ?
35 PsiBlast_CBE 78.1242% -96 - C3 -1OFN 2.0 ?
7 PsiBlast_PDB 78.1046%-108 - C3 -4HN1 2.6 CHMJ_STRBI
9 PsiBlast_PDB 77.9242% -95 - C3 -1OI6 3.6 ?
6 PsiBlast_PDB 77.8147%-103 - C3 -4HMZ 5.1 CHMJ_STRBI
64 HHSearch 77.7140% -91 - C3 -1OI6 3.6 ?
30 PsiBlast_CBE 77.2947%-106 - C3 -4HMZ 4.1 CHMJ_STRBI
28 PsiBlast_CBE 77.2047%-107 - C3 -4HMZ 4.5 CHMJ_STRBI
31 PsiBlast_CBE 76.9846%-109 - C3 -4HN1 3.4 CHMJ_STRBI
32 PsiBlast_CBE 76.9446%-105 - C3 -4HN1 3.8 CHMJ_STRBI
26 PsiBlast_CBE 76.7147%-108 - C3 -4HN0 Error CHMJ_STRBI
36 PsiBlast_CBE 76.5240%-104 - C3 -2IXH 5.4 RMLC_PSEAE
12 PsiBlast_PDB 76.5040%-100 - C3 -2IXJ 3.3 RMLC_PSEAE
25 PsiBlast_CBE 76.2847%-109 - C3 -4HN0 Error CHMJ_STRBI
71 HHSearch 76.2340%-106 * C3 *2IXK 4.6 RMLC_PSEAE
38 PsiBlast_CBE 75.9440%-101 - C3 -2IXI 3.1 RMLC_PSEAE
11 PsiBlast_PDB 75.8040%-105 - C3 -1RTV 4.1 RMLC_PSEAE
37 PsiBlast_CBE 75.6840%-102 - C3 -2IXK 4.7 RMLC_PSEAE
13 PsiBlast_PDB 75.6540%-103 - C3 -2IXH 5.8 RMLC_PSEAE
15 PsiBlast_PDB 75.5040%-105 - C3 -2IXK 4.5 RMLC_PSEAE
85 Fugue 75.0836%-103 - C3 -1DZR 3.1 RMLC_SALTY
14 PsiBlast_PDB 75.0540%-103 - C3 -2IXI 4.0 RMLC_PSEAE
84 Fugue 74.8736%-102 - C3 -1DZR 3.1 RMLC_SALTY
69 HHSearch 74.4237%-104 - C3 -1DZR 3.1 RMLC_SALTY
42 PsiBlast_CBE 72.1533%-112 - C3 -3RYK 3.4 ?
41 PsiBlast_CBE 71.9233%-108 - C3 -3RYK 2.7 ?
17 PsiBlast_PDB 71.5039%-107 - C3 -1DZT 4.1 RMLC_SALTY
68 HHSearch 71.4834%-108 - C3 -3RYK 3.4 ?
39 PsiBlast_CBE 70.9139%-112 - C3 -1DZT 3.7 RMLC_SALTY
16 PsiBlast_PDB 70.8239%-107 - C3 -1DZR 3.1 RMLC_SALTY
19 PsiBlast_PDB 70.3843%-109 - C3 -1EPZ 2.8 RMLC_METTH