@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3485c: (2016-05-20 )
MNSRAPRNLAVSSPSAQVTGRMVQNGENLFQFRREGPQVQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAVKDIEALKTGAIGYEPADITDEEQTLRVVDAATAWHGRLHGVVHCAGGSQTIGPITQIDSQAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHMMKLAADELGPSWVRVNSIRPGLIRTDLVVPVTESPELSADYRVCTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSPMLEPVFGADGLRGVVG

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHO_B_7(1FMC)
HDHA_ECOLI
[Raw transfer]




CHO_B_5(1AHI)
HDHA_ECOLI
[Raw transfer]




CHO_A_5(1FMC)
HDHA_ECOLI
[Raw transfer]




GOL_C_18(3PK0)
?
[Raw transfer]




GOL_B_14(3PK0)
?
[Raw transfer]




IU5_A_7(1AHI)
HDHA_ECOLI
[Raw transfer]




GOL_A_9(3PK0)
?
[Raw transfer]




GOL_D_22(3PK0)
?
[Raw transfer]




EDO_A_12(3RIH)
?
[Raw transfer]




1PS_B_6(4URE)
?
[Raw transfer]




EDO_C_26(3RIH)
?
[Raw transfer]




EDO_B_18(3RIH)
?
[Raw transfer]




MPD_A_21(4H15)
?
[Raw transfer]




PG5_A_6(3RIH)
?
[Raw transfer]




PG5_B_14(3RIH)
?
[Raw transfer]




EDO_C_9(4BMN)
?
[Raw transfer]




EDO_B_7(4BMN)
?
[Raw transfer]




1 PsiBlast_PDB 95.2784%-111 - C1 -3SVT - ? -
122 HHSearch 69.3633%-102 - C1 -3GAF - ? -
15 PsiBlast_PDB 69.3632%-111 - C1 -3O4R - DHRS4_HUMAN -
120 HHSearch 68.4931%-101 - C1 -3WDS - ? -
30 PsiBlast_CBE 68.3833%-103 - C1 -4URE 3.0 ?
34 PsiBlast_CBE 68.0432%-110 - C1 -3O4R - DHRS4_HUMAN -
29 PsiBlast_CBE 68.0333%-102 - C1 -4URF - ? -
119 HHSearch 67.8928%-107 - C1 -2ZAT - DHRS4_PIG -
33 PsiBlast_CBE 67.8732%-111 - C1 -3O4R - DHRS4_HUMAN -
32 PsiBlast_CBE 67.7832%-110 - C1 -3O4R - DHRS4_HUMAN -
103 PsiBlast_CBE 67.3731% -99 - C1 -4RF2 - ? -
4 PsiBlast_PDB 67.1834%-102 - C1 -1FMC 6.9 HDHA_ECOLI
22 PsiBlast_CBE 67.1034%-100 - C1 -1AHI 6.1 HDHA_ECOLI
94 PsiBlast_CBE 67.0731%-103 - C1 -1WNT - DCXR_HUMAN -
2 PsiBlast_PDB 67.0434%-102 - C1 -1AHI 6.9 HDHA_ECOLI
12 PsiBlast_PDB 66.9633%-102 - C1 -4URE - ? -
13 PsiBlast_PDB 66.8433%-102 - C1 -4URF - ? -
121 HHSearch 66.6830%-100 - C1 -4J2H - ? -
128 HHSearch 66.5726% -95 - C1 -3AI3 - ? -
96 PsiBlast_CBE 66.4431%-105 - C1 -1WNT - DCXR_HUMAN -
21 PsiBlast_CBE 66.3534%-104 - C1 -1FMC 6.2 HDHA_ECOLI
25 PsiBlast_CBE 64.6433% -92 - C1 -3PK0 2.7 ?
26 PsiBlast_CBE 64.5833% -92 - C1 -3PK0 2.7 ?
27 PsiBlast_CBE 64.0733% -92 - C1 -3PK0 2.6 ?
10 PsiBlast_PDB 63.4233% -90 - C1 -3PK0 2.6 ?
20 PsiBlast_PDB 61.8134% -91 - C1 -3RIH 2.5 ?
51 PsiBlast_CBE 60.3433%-100 - C1 -4BMN 3.2 ?
37 PsiBlast_CBE 60.2034% -90 - C1 -3RIH 3.5 ?
38 PsiBlast_CBE 60.1034% -91 - C1 -3RIH 3.6 ?
52 PsiBlast_CBE 58.2433% -99 - C1 -4BMN 3.0 ?