@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3518c: (2016-05-20 )
MTEAPDVDLADGNFYASREARAAYRWMRANQPVFRDRNGLAAASTYQAVIDAERQPELFSNAGGIRPDQPALPMMIDMDDPAHLLRRKLVNAGFTRKRVKDKEASIAALCDTLIDAVCERGECDFVRDLAAPLPMAVIGDMLGVRPEQRDMFLRWSDDLVTFLSSHVSQEDFQITMDAFAAYNDFTRATIAARRADPTDDLVSVLVSSEVDGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPSLLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADDSVLPLRPANFVSGLESMPVVFTPSPPLG

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_2(2XKR)
CP142_MYCTU
[Raw transfer]




HEM_A_2(2XKR)
CP142_MYCTU
[Raw transfer]




HEM_A_2(4UAX)
?
[Raw transfer]




HEM_B_7(4TRI)
?
[Raw transfer]




HEM_A_3(4TRI)
?
[Raw transfer]




HEM_A_2(2WM4)
CP124_MYCTU
[Raw transfer]




HEM_A_2(2WM5)
CP124_MYCTU
[Raw transfer]




HEM_A_2(3A4H)
CPVDH_PSEAH
[Raw transfer]




C3S_B_6(4TRI)
?
[Raw transfer]




HEM_A_2(2WM5)
CP124_MYCTU
[Raw transfer]




HEM_A_2(3CV9)
CPXE_STRGO
[Raw transfer]




C3S_A_4(4TRI)
?
[Raw transfer]




HEM_A_2(3VRM)
CPVDH_PSEAH
[Raw transfer]




HEM_A_2(3A4G)
CPVDH_PSEAH
[Raw transfer]




HEM_A_2(3A4G)
CPVDH_PSEAH
[Raw transfer]




HEM_A_2(4GGV)
?
[Raw transfer]




HEM_B_11(4XE3)
?
[Raw transfer]




HEM_B_6(2BVJ)
PIKC_STRVZ
[Raw transfer]




FMT_A_4(3ZPI)
PIKC_STRVZ
[Raw transfer]




GOL_A_8(3MGX)
?
[Raw transfer]




GOL_A_5(3MGX)
?
[Raw transfer]




1 PsiBlast_PDB 99.52100%-102 - C6 -2XKR 12.7 CP142_MYCTU
121 HHSearch 94.9497%-102 - C6 -2XKR 12.7 CP142_MYCTU
27 PsiBlast_CBE 93.7478% -98 - C6 -2YOO - ? -
22 PsiBlast_CBE 93.7378% -99 - C6 -3ZBY - ? -
5 PsiBlast_PDB 93.5478%-100 - C6 -4UAX 12.7 ?
2 PsiBlast_PDB 93.4578%-101 - C6 -2YOO - ? -
3 PsiBlast_PDB 93.4478%-101 - C6 -3ZBY - ? -
26 PsiBlast_CBE 93.3578% -99 - C6 -3ZBY - ? -
29 PsiBlast_CBE 93.2378% -99 - C6 -2YOO - ? -
21 PsiBlast_CBE 93.1978% -97 - C6 -4TRI 12.9 ?
28 PsiBlast_CBE 93.1478% -97 - C6 -2YOO - ? -
25 PsiBlast_CBE 93.0178%-100 - C6 -3ZBY - ? -
24 PsiBlast_CBE 92.3378%-100 - C6 -3ZBY - ? -
4 PsiBlast_PDB 91.8478% -99 - C6 -4TRI 12.7 ?
43 PsiBlast_CBE 79.4035% -95 - C6 -3A4Z - CPVDH_PSEAH -
12 PsiBlast_PDB 79.3435% -89 - C6 -3A4G 11.9 CPVDH_PSEAH
19 PsiBlast_PDB 78.7935% -92 - C6 -3VRM 12.1 CPVDH_PSEAH
35 PsiBlast_CBE 78.4635% -97 - C6 -3A51 - CPVDH_PSEAH -
39 PsiBlast_CBE 78.4435% -94 - C6 -3A50 - CPVDH_PSEAH -
38 PsiBlast_CBE 78.3135% -92 - C6 -3A50 - CPVDH_PSEAH -
13 PsiBlast_PDB 77.7135% -85 - C6 -3A4H 12.2 CPVDH_PSEAH
6 PsiBlast_PDB 76.5035% -77 - C6 -2WM4 12.3 CP124_MYCTU
140 HHSearch 76.4935% -83 - C6 -3A4G 12.3 CPVDH_PSEAH
135 HHSearch 75.9236% -82 - C6 -2WM5 12.3 CP124_MYCTU
7 PsiBlast_PDB 75.4735% -75 - C6 -2WM5 12.4 CP124_MYCTU
20 PsiBlast_PDB 73.6934% -92 - C6 -4GGV 11.8 ?
108 PsiBlast_CBE 69.9533% -93 - C6 -3CV9 12.1 CPXE_STRGO
82 PsiBlast_CBE 69.6134% -88 - C6 -3ZPI 2.9 PIKC_STRVZ
59 PsiBlast_CBE 69.1934% -89 - C6 -2BVJ 12.7 PIKC_STRVZ
45 PsiBlast_CBE 66.3833% -75 - C6 -4XE3 12.4 ?