@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3566c: (2016-05-21 )
MALDLTAYFDRINYRGATDPTLDVLQDLVTVHSRTIPFENLDPLLGVPVDDLSPQALADKLVLRRRGGYCFEHNGLMGYVLAELGYRVRRFAARVVWKLAPDAPLPPQTHTLLGVTFPGSGGCYLVDVGFGGQTPTSPLRLETGAVQPTTHEPYRLEDRVDGFVLQAMVRDTWQTLYEFTTQTRPQIDLKVASWYASTHPASKFVTGLTAAVITDDARWNLSGRDLAVHRAGGTEKIRLADAAAVVDTLSERFGINVADIGERGALETRIDELLARQPGADAP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_B_4(2VFC)
?
[Raw transfer]



COA_A_3(2VFC)
?
[Raw transfer]



ISZ_A_5(1W6F)
NAT_MYCSM
[Raw transfer]



ISZ_B_6(1W6F)
NAT_MYCSM
[Raw transfer]



ISZ_C_7(1W6F)
NAT_MYCSM
[Raw transfer]



ISZ_D_8(1W6F)
NAT_MYCSM
[Raw transfer]



HLZ_A_2(3LTW)
?
[Raw transfer]



P18_A_2(4B55)
?
[Raw transfer]



COA_B_4(4NV7)
?
[Raw transfer]



FMT_A_6(3LTW)
?
[Raw transfer]



COA_A_3(4NV7)
?
[Raw transfer]



HLZ_A_3(3LTW)
?
[Raw transfer]
1 PsiBlast_PDB 98.03100%-109 - C5 -4BGF - ? -
3 PsiBlast_PDB 92.4376%-102 - C5 -2VFB - ? -
21 PsiBlast_CBE 91.4376%-105 - C5 -2VFC 8.1 ?
6 PsiBlast_PDB 90.7976%-101 - C5 -4C5P - ? -
26 HHSearch 90.7276%-102 - C5 -4C5P - ? -
5 PsiBlast_PDB 90.3876% -99 - C5 -3LTW 3.9 ?
2 PsiBlast_PDB 90.2376% -99 - C5 -4B55 3.4 ?
8 PsiBlast_PDB 90.0260%-107 - C5 -1GX3 - NAT_MYCSM -
4 PsiBlast_PDB 89.7776%-100 - C5 -2VFC 7.6 ?
7 PsiBlast_PDB 89.7160%-105 - C5 -1W6F 2.8 NAT_MYCSM
24 PsiBlast_CBE 89.0860%-109 - C5 -1W6F 2.9 NAT_MYCSM
29 HHSearch 88.8061%-105 - C5 -1W5R - NAT_MYCSM -
9 PsiBlast_PDB 88.6260%-105 - C5 -1W5R - NAT_MYCSM -
23 PsiBlast_CBE 88.1560%-107 - C5 -1W6F 2.8 NAT_MYCSM
22 PsiBlast_CBE 87.7660%-107 - C5 -1W6F 2.8 NAT_MYCSM
12 PsiBlast_PDB 79.0643% -97 - C5 -4NV8 - ? -
11 PsiBlast_PDB 78.9243% -97 - C5 -4NV7 5.6 ?
25 PsiBlast_CBE 78.8243% -97 - C5 -4NV7 7.3 ?
10 PsiBlast_PDB 77.7243% -97 - C5 -2BSZ - ? -
27 HHSearch 76.7943% -94 - C5 -4NV8 - ? -