@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3608c: (2016-05-21 )
MSPAPVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGAERIERDG

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMM_A_3(1EYE)
DHPS1_MYCTU
[Raw transfer]




HH2_A_3(3TZF)
?
[Raw transfer]




PMM_A_3(1EYE)
DHPS1_MYCTU
[Raw transfer]




HH2_B_5(3TZF)
?
[Raw transfer]




2PH_C_3(1AJ2)
DHPS_ECOLI
[Raw transfer]




HH2_A_11(1TWW)
?
[Raw transfer]




0J2_A_7(4D8Z)
?
[Raw transfer]




HH2_D_4(2DZB)
?
[Raw transfer]




XTZ_A_3(3TYE)
?
[Raw transfer]




B57_A_3(3H2A)
?
[Raw transfer]




0HY_A_7(4D8A)
?
[Raw transfer]




PMM_A_2(2BMB)
FOL1_YEAST
[Raw transfer]




PT1_A_3(3TYU)
?
[Raw transfer]




PMM_A_4(2VEG)
DHPS_STRR6
[Raw transfer]




0J5_B_8(4DAI)
?
[Raw transfer]




78H_A_3(2Y5S)
?
[Raw transfer]




78H_B_8(3TYA)
?
[Raw transfer]




78H_A_3(2Y5S)
?
[Raw transfer]




78H_B_16(2Y5S)
?
[Raw transfer]




PT1_O_15(1TX0)
?
[Raw transfer]




78H_A_3(3TYA)
?
[Raw transfer]




PT1_P_16(1TX0)
?
[Raw transfer]




PMM_N_14(1TWZ)
?
[Raw transfer]




680_O_15(1TX2)
?
[Raw transfer]




PT1_A_5(3TR9)
?
[Raw transfer]




0J5_A_3(4DAI)
?
[Raw transfer]




B63_A_3(3H2O)
?
[Raw transfer]




Z17_B_14(4D9P)
?
[Raw transfer]




B52_A_3(3H21)
?
[Raw transfer]




B53_A_3(3H22)
?
[Raw transfer]




PMM_M_13(1TWZ)
?
[Raw transfer]




0J2_B_13(4D8Z)
?
[Raw transfer]




680_P_16(1TX2)
?
[Raw transfer]




XHP_A_3(3TYZ)
?
[Raw transfer]




XHP_B_7(3TYZ)
?
[Raw transfer]




PH2_C_3(1AJ0)
DHPS_ECOLI
[Raw transfer]




B55_A_3(3H24)
?
[Raw transfer]




XHP_B_8(3TYB)
?
[Raw transfer]




Z25_A_3(4DB7)
?
[Raw transfer]




PH2_C_3(1AJ0)
DHPS_ECOLI
[Raw transfer]




B61_A_3(3H2M)
?
[Raw transfer]




XHP_A_3(3TYB)
?
[Raw transfer]




B57_B_7(3H2A)
?
[Raw transfer]




B55_B_9(3H24)
?
[Raw transfer]




XHP_B_10(3TYC)
?
[Raw transfer]




XHP_A_4(3TYD)
?
[Raw transfer]




XHP_B_12(3TYD)
?
[Raw transfer]




B62_A_3(3H2N)
?
[Raw transfer]




B61_B_8(3H2M)
?
[Raw transfer]




Z17_A_8(4D9P)
?
[Raw transfer]




B62_B_8(3H2N)
?
[Raw transfer]




B56_A_3(3H26)
?
[Raw transfer]




B60_A_3(3H2F)
?
[Raw transfer]




B58_B_9(3H2C)
?
[Raw transfer]




B54_A_3(3H23)
?
[Raw transfer]




POP_B_8(3TYZ)
?
[Raw transfer]




POP_A_4(3TYZ)
?
[Raw transfer]




PHB_B_9(3TYB)
?
[Raw transfer]




85 HHSearch 98.20100%-121 - C6 -1EYE 3.7 DHPS1_MYCTU
1 PsiBlast_PDB 98.20100%-121 - C6 -1EYE 3.7 DHPS1_MYCTU
68 PsiBlast_CBE 79.5640%-109 - C6 -2Y5S 5.4 ?
67 PsiBlast_CBE 77.8240%-107 - C6 -2Y5S 5.8 ?
24 PsiBlast_CBE 77.4239%-114 - C6 -4NIL - ? -
4 PsiBlast_PDB 77.1940% -99 - C6 -1AJZ - DHPS_ECOLI -
46 PsiBlast_CBE 77.0639%-113 - C6 -3H2E - ? -
3 PsiBlast_PDB 76.8640%-101 - C6 -1AJ2 6.0 DHPS_ECOLI
87 HHSearch 76.8141%-103 - C6 -2Y5S 5.4 ?
83 HHSearch 76.7645%-109 - C6 -2DQW - ? -
89 HHSearch 76.6941% -96 - C6 -1AJ0 3.6 DHPS_ECOLI
50 PsiBlast_CBE 76.2539%-112 - C6 -1TX2 3.2 ?
69 PsiBlast_CBE 76.0940%-116 - C6 -2Y5J - ? -
35 PsiBlast_CBE 76.0839%-111 - C6 -4D8A 4.4 ?
33 PsiBlast_CBE 75.7739%-108 - C6 -4D8Z 4.0 ?
51 PsiBlast_CBE 75.6739%-111 - C6 -1TX0 4.8 ?
8 PsiBlast_PDB 75.6539%-110 - C6 -1TX0 4.7 ?
41 PsiBlast_CBE 75.5439%-109 - C6 -3TYB 3.6 ?
11 PsiBlast_PDB 75.5039%-114 - C6 -3H22 3.6 ?
21 PsiBlast_CBE 75.4939%-113 - C6 -4NL1 - ? -
15 PsiBlast_PDB 75.3839%-110 - C6 -3H2A 3.5 ?
39 PsiBlast_CBE 75.2939%-106 - C6 -3TYC 3.8 ?
19 PsiBlast_PDB 75.2739%-109 - C6 -3H2N 3.1 ?
30 PsiBlast_CBE 75.0939%-109 - C6 -4DAI 3.8 ?
44 PsiBlast_CBE 75.0539%-106 - C6 -3H2N 3.3 ?
18 PsiBlast_PDB 74.9439%-102 - C6 -3H2M 4.3 ?
2 PsiBlast_PDB 74.8540% -96 - C6 -1AJ0 3.6 DHPS_ECOLI
34 PsiBlast_CBE 74.8139%-107 - C6 -4D8Z 4.2 ?
28 PsiBlast_CBE 74.7539%-111 - C6 -4DB7 3.9 ?
6 PsiBlast_PDB 74.7139%-104 - C6 -1TWW 4.2 ?
31 PsiBlast_CBE 74.6939%-110 - C6 -4D9P 3.7 ?
10 PsiBlast_PDB 74.4539%-108 - C6 -3H21 3.2 ?
38 PsiBlast_CBE 74.4139%-108 - C6 -3TYD 3.6 ?
32 PsiBlast_CBE 74.3939%-109 - C6 -4D9P 3.8 ?
17 PsiBlast_PDB 74.3339%-103 - C6 -3H2F 4.4 ?
47 PsiBlast_CBE 74.3239%-113 - C6 -3H2C 3.7 ?
52 PsiBlast_CBE 74.2939%-108 - C6 -1TWZ 3.7 ?
7 PsiBlast_PDB 74.1339%-105 - C6 -1TWZ 3.6 ?
12 PsiBlast_PDB 73.9439%-102 - C6 -3H23 4.0 ?
14 PsiBlast_PDB 73.9039%-107 - C6 -3H26 3.5 ?
48 PsiBlast_CBE 73.8739%-107 - C6 -3H2A 3.7 ?
37 PsiBlast_CBE 73.7439%-110 - C6 -3TYD 3.4 ?
29 PsiBlast_CBE 73.6439%-111 - C6 -4DAI 3.4 ?
43 PsiBlast_CBE 73.5539%-108 - C6 -3TYA 5.0 ?
42 PsiBlast_CBE 73.5039%-109 - C6 -3TYA 4.4 ?
40 PsiBlast_CBE 73.4739%-108 - C6 -3TYB 3.5 ?
49 PsiBlast_CBE 73.3739%-109 - C6 -3H24 3.8 ?
36 PsiBlast_CBE 73.3739%-102 - C6 -3TYE 6.2 ?
58 PsiBlast_CBE 73.0139% -93 - C6 -3TYZ 3.8 ?
45 PsiBlast_CBE 72.7639%-109 - C6 -3H2M 4.1 ?
9 PsiBlast_PDB 72.7139%-102 - C6 -1TX2 3.4 ?
59 PsiBlast_CBE 72.5439% -94 - C6 -3TYZ 3.7 ?
13 PsiBlast_PDB 72.4539%-103 - C6 -3H24 3.7 ?
57 PsiBlast_CBE 72.4239% -94 - C6 -3TZF 6.4 ?
56 PsiBlast_CBE 72.2939% -93 - C6 -3TZF 6.2 ?
20 PsiBlast_PDB 71.4139%-107 - C6 -3H2O 4.6 ?
61 PsiBlast_CBE 71.3044%-112 - C6 -2DZB 4.3 ?
70 PsiBlast_CBE 70.6534%-108 - C6 -2VEG 4.6 DHPS_STRR6
93 HHSearch 69.2232% -92 - C6 -3TR9 5.3 ?
60 PsiBlast_CBE 68.9739% -95 - C6 -3TYU 5.6 ?
84 HHSearch 68.5433% -92 - C6 -2BMB 4.3 FOL1_YEAST