@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3610c: (2016-05-21 )
MNRKNVTRTITAIAVVVLLGWSFFYFSDDTRGYKPVDTSVAITQINGDNVKSAQIDDREQQLRLILKKGNNETDGSEKVITKYPTGYAVDLFNALSAKNAKVSTVVNQGSILGELLVYVLPLLLLVGLFVMFSRMQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVEKRPRLTMFDDFGGRIPSDKPPIKTPGELAIERGEPWPQPVPEPAFKAAIAQATQAAEAARSDAGQTGHGANGSPAGTHRSGDRQYGSTQPDYGAPAGWHAPGWPPRSSHRPSYSGEPAPTYPGQPYPTGQADPGSDESSAEQDDEVSRTKPAHG

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_A_3(4KO8)
TERA_HUMAN
[Raw transfer]



ADP_C_8(2R65)
FTSH_HELPY
[Raw transfer]



AGS_A_3(4KO8)
TERA_HUMAN
[Raw transfer]



AGS_B_5(4KO8)
TERA_HUMAN
[Raw transfer]



ADP_B_5(3H4M)
PAN_METJA
[Raw transfer]



AGS_B_5(3HU3)
TERA_HUMAN
[Raw transfer]



ADP_A_5(4WW0)
FTSH_AQUAE
[Raw transfer]



ADP_A_5(4WW0)
FTSH_AQUAE
[Raw transfer]



ADP_C_9(4WW0)
FTSH_AQUAE
[Raw transfer]



ATP_A_3(2ZAN)
VPS4B_MOUSE
[Raw transfer]



ADP_C_6(3H4M)
PAN_METJA
[Raw transfer]



ADP_A_2(2QZ4)

[Raw transfer]



AGS_A_3(3HU3)
TERA_HUMAN
[Raw transfer]



ADP_B_7(4WW0)
FTSH_AQUAE
[Raw transfer]



ADP_A_6(2R65)
FTSH_HELPY
[Raw transfer]



ADP_A_4(3H4M)
PAN_METJA
[Raw transfer]



ADP_E_10(2R65)
FTSH_HELPY
[Raw transfer]



ADP_A_2(2QZ4)

[Raw transfer]



ADP_B_7(2R65)
FTSH_HELPY
[Raw transfer]



ADP_D_9(2R65)
FTSH_HELPY
[Raw transfer]



ADP_A_2(1E32)
TERA_MOUSE
[Raw transfer]



ADP_G_7(1R7R)
TERA_MOUSE
[Raw transfer]



ANP_B_2(1IY0)
FTSH_THET8
[Raw transfer]



ADP_B_2(1IY1)
FTSH_THET8
[Raw transfer]
1 PsiBlast_PDB 92.5057% -90 - C1 -3KDS - FTSH_THEMA -
25 PsiBlast_CBE 90.3357% -95 - C1 -2CE7 - FTSH_THEMA -
101 Fugue 90.0857% -92 - C1 -2CE7 - FTSH_THEMA -
22 PsiBlast_CBE 90.0257% -96 - C1 -2CEA - FTSH_THEMA -
23 PsiBlast_CBE 89.8157% -93 - C1 -2CEA - FTSH_THEMA -
26 PsiBlast_CBE 89.5257% -90 - C1 -2CE7 - FTSH_THEMA -
112 HHSearch 89.3053% -95 - C1 -4WW0 8.4 FTSH_AQUAE
24 PsiBlast_CBE 89.0557% -92 - C1 -2CE7 - FTSH_THEMA -
28 PsiBlast_CBE 88.2357% -83 - C1 -2DHR - FTSH_THET8 -
21 PsiBlast_CBE 88.1457% -95 - C1 -2CEA - FTSH_THEMA -
4 PsiBlast_PDB 88.0452% -96 - C1 -4WW0 8.4 FTSH_AQUAE
113 HHSearch 87.6356% -83 - C1 -2DHR - FTSH_THET8 -
2 PsiBlast_PDB 87.3757% -83 - C1 -2DHR - FTSH_THET8 -
30 PsiBlast_CBE 87.1057% -81 - C1 -2DHR - FTSH_THET8 -
39 PsiBlast_CBE 87.0252% -95 - C1 -4WW0 7.9 FTSH_AQUAE
5 PsiBlast_PDB 86.4352% -93 - C1 -4Z8X - FTSH_AQUAE -
33 PsiBlast_CBE 86.2257% -80 - C1 -4EIW - FTSH_THET8 -
31 PsiBlast_CBE 86.0557% -85 - C1 -2DHR - FTSH_THET8 -
38 PsiBlast_CBE 86.0352% -94 - C1 -4Z8X - FTSH_AQUAE -
3 PsiBlast_PDB 86.0157% -78 - C1 -4EIW - FTSH_THET8 -
40 PsiBlast_CBE 85.1652% -89 - C1 -4WW0 8.0 FTSH_AQUAE
12 PsiBlast_PDB 70.4770% -92 - C1 -1IY1 5.5 FTSH_THET8
11 PsiBlast_PDB 69.1370% -90 - C1 -1IY0 5.2 FTSH_THET8
42 PsiBlast_CBE 67.5662%-100 - C1 -2R65 5.0 FTSH_HELPY
9 PsiBlast_PDB 67.4662% -94 - C1 -2R65 6.3 FTSH_HELPY
123 HHSearch 66.5241% -84 - C1 -4KO8 8.1 TERA_HUMAN
44 PsiBlast_CBE 66.2462% -97 - C1 -2R65 6.0 FTSH_HELPY
41 PsiBlast_CBE 65.8162% -92 - C1 -2R65 5.5 FTSH_HELPY
43 PsiBlast_CBE 64.7262% -87 - C1 -2R65 7.0 FTSH_HELPY
14 PsiBlast_PDB 64.6345% -87 - C1 -3H4M 7.3 PAN_METJA
46 PsiBlast_CBE 64.4345% -83 - C1 -3H4M 7.0 PAN_METJA
45 PsiBlast_CBE 64.0745% -87 - C1 -3H4M 6.3 PAN_METJA
85 PsiBlast_CBE 62.6744% -88 - C1 -3HU3 7.9 TERA_HUMAN
84 PsiBlast_CBE 62.1044% -86 - C1 -3HU3 8.0 TERA_HUMAN
127 HHSearch 61.9751% -97 - C1 -2QZ4 8.0
83 PsiBlast_CBE 61.8044% -85 - C1 -4KO8 8.1 TERA_HUMAN
13 PsiBlast_PDB 60.7150% -97 - C1 -2QZ4 8.0
92 PsiBlast_CBE 60.2745% -89 - C1 -1E32 6.6 TERA_MOUSE
82 PsiBlast_CBE 60.2544% -83 - C1 -4KO8 8.1 TERA_HUMAN
69 PsiBlast_CBE 60.2445% -91 - C1 -1R7R 4.9 TERA_MOUSE
129 HHSearch 56.2136% -91 - C1 -2ZAN 5.5 VPS4B_MOUSE