@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3634c: (2016-05-21 )
MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTADLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTSSGGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRVSADVGGGLRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDLKRSCLDIGLAERVLGWRPQIELADGVRRTVEYFRHKHTD

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_3(4ZRM)
?
[Raw transfer]



NAD_A_3(4ZRM)
?
[Raw transfer]



NAD_A_5(2P5U)
?
[Raw transfer]



NAD_B_5(4ZRN)
?
[Raw transfer]



NAD_A_3(4ZRN)
?
[Raw transfer]



NAD_D_8(2P5U)
?
[Raw transfer]



NAD_B_6(4ZRM)
?
[Raw transfer]



NAD_A_2(2P5Y)
?
[Raw transfer]



NAD_A_4(2Q1W)
?
[Raw transfer]



NAD_C_3(1SB8)
?
[Raw transfer]



NAD_C_6(2Q1W)
?
[Raw transfer]



NAD_C_7(2P5U)
?
[Raw transfer]



NAD_B_6(2P5U)
?
[Raw transfer]



NAD_C_3(1SB9)
?
[Raw transfer]



GOL_B_7(4ZRM)
?
[Raw transfer]



GOL_A_5(4ZRM)
?
[Raw transfer]
21 PsiBlast_CBE 89.5745% -89 - C1 -4ZRN 9.3 ?
115 HHSearch 89.5446% -86 * C1 *4ZRM 10.5 ?
22 PsiBlast_CBE 89.2045% -86 - C1 -4ZRM 11.6 ?
1 PsiBlast_PDB 88.9245% -86 - C1 -4ZRM 10.4 ?
2 PsiBlast_PDB 88.6545% -87 - C1 -4ZRN 10.9 ?
25 PsiBlast_CBE 79.0244% -81 - C1 -2P5U 10.6 ?
4 PsiBlast_PDB 78.8444% -77 - C1 -2P5Y 11.1 ?
112 HHSearch 76.9736% -88 - C1 -1R6D - ? -
104 HHSearch 76.0727% -85 - C1 -4EGB - ? -
86 PsiBlast_CBE 75.5933% -88 - C1 -2Q1W - ? -
120 HHSearch 75.0030% -86 - C1 -1KEW - RMLB_SALTY -
23 PsiBlast_CBE 74.9144% -75 - C1 -2P5U 10.3 ?
118 HHSearch 74.3129% -91 - C1 -2HUN - ? -
87 PsiBlast_CBE 73.8233% -85 - C1 -2Q1W 12.2 ?
113 HHSearch 73.7335% -83 - C1 -3KO8 - ? -
5 PsiBlast_PDB 73.4834% -81 - C1 -1R6D - ? -
42 PsiBlast_CBE 72.7131% -84 - C1 -3RU7 - GNE_PLESH -
24 PsiBlast_CBE 72.7044% -75 - C1 -2P5U 10.5 ?
38 PsiBlast_CBE 72.5331% -82 - C1 -3RUA - GNE_PLESH -
51 PsiBlast_CBE 72.0231% -81 - C1 -3RUC - GNE_PLESH -
3 PsiBlast_PDB 71.6144% -74 - C1 -2P5U 6.4 ?
85 PsiBlast_CBE 69.2033% -87 - C1 -2Q1W 11.6 ?
8 PsiBlast_PDB 64.6733% -76 - C1 -1SB9 11.5 ?
7 PsiBlast_PDB 64.4033% -75 - C1 -1SB8 11.3 ?