@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3648c: (2016-05-22 )
MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQATGVRSL

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_R_3(3PF4)
CSPB_BACSU
[Raw transfer]

-

TRS_A_7(1C9O)
CSPB_BACCL
[Raw transfer]




TRS_A_7(1C9O)
CSPB_BACCL
[Raw transfer]




TRS_A_7(1C9O)
CSPB_BACCL
[Raw transfer]




TRS_B_6(1C9O)
CSPB_BACCL
[Raw transfer]




CHAIN_S_4(3PF5)
CSPB_BACSU
[Raw transfer]

-

NACID_U_3(3TS2)
LN28A_MOUSE
[Raw transfer]

-

CHAIN_R_3(3PF5)
CSPB_BACSU
[Raw transfer]

-

CHAIN_R_3(3PF4)
CSPB_BACSU
[Raw transfer]

-

NACID_C_1(2HAX)
CSPB_BACCL
[Raw transfer]

-

NACID_D_2(2HAX)
CSPB_BACCL
[Raw transfer]

-

NACID_B_1(2ES2)
CSPB_BACSU
[Raw transfer]

-

3 PsiBlast_PDB 91.4260%-107 - C7 -1MJC - CSPA_ECOLI -
8 PsiBlast_PDB 90.0562% -95 - C7 -1C9O 2.1 CSPB_BACCL
11 PsiBlast_PDB 89.7464%-107 - C7 -2I5M - CSPB_BACSU -
14 PsiBlast_PDB 89.7264%-103 - C7 -1HZC - CSPB_BACCL -
7 PsiBlast_PDB 89.7162% -91 - C7 -1I5F - CSPB_BACCL -
52 Fugue 89.6462% -98 - C7 -1C9O 2.1 CSPB_BACCL
12 PsiBlast_PDB 88.9064% -99 - C7 -1HZA - CSPB_BACCL -
63 HHSearch 88.4561% -98 - C7 -1C9O 2.1 CSPB_BACCL
25 PsiBlast_CBE 88.2862%-108 - C7 -3PF5 2.8 CSPB_BACSU
24 PsiBlast_CBE 88.2662%-110 - C7 -3PF5 6.8 CSPB_BACSU
23 PsiBlast_CBE 87.9964%-104 - C7 -1HZB - CSPB_BACCL -
10 PsiBlast_PDB 87.9362% -90 - C7 -1HZ9 - CSPB_BACCL -
1 PsiBlast_PDB 87.5963% -89 - C7 -3I2Z - ? -
13 PsiBlast_PDB 87.3764%-106 - C7 -1HZB - CSPB_BACCL -
27 PsiBlast_CBE 87.1362%-108 - C7 -3PF4 Error CSPB_BACSU
62 HHSearch 86.2261% -81 - C7 -3I2Z - ? -
15 PsiBlast_PDB 86.2060% -98 - C7 -2MO0 - ? -
22 PsiBlast_CBE 86.1562% -94 - C7 -1C9O 2.0 CSPB_BACCL
26 PsiBlast_CBE 86.1362%-108 - C7 -3PF4 7.4 CSPB_BACSU
2 PsiBlast_PDB 86.0860% -95 - C7 -2L15 - CSPA_ECOLI -
80 HHSearch 86.0342%-106 * C7 *3TS2 8.9 LN28A_MOUSE
17 PsiBlast_PDB 83.8862%-110 - C7 -2ES2 9.5 CSPB_BACSU
21 PsiBlast_CBE 80.0962%-104 - C7 -2HAX 10.1 CSPB_BACCL
9 PsiBlast_PDB 79.9462%-103 - C7 -2HAX 9.1 CSPB_BACCL