@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3663c: (2016-05-22 )
MSVPAAPLLSVEGLEVTFGTDAPAVCGVDLAVRSGQTVAVVGESGSGKSTTAAAILGLLPAGGRITAGRVVFDGRDITGADAKRLRSIRGREIGYVPQDPMTNLNPVWKVGFQVTEALRANTDGRAARRRAVELLAEAGLPDPAKQAGRYPHQLSGGMCQRALIAIGLAGRPRLLIADEPTSALDVTVQRQVLDHLQGLTDELGTALLLITHDLALAAQRAEAVVVVRRGVVVESGAAQSILQSPQHEYTRRLVAAAPSLTARSRRPPESRSRATTQAGDILVVSELTKIYRESRGAPWRRVESRAVDGVSFRLPRASTLAIVGESGSGKSTLARMVLGLLQPTSGTVVFDGTYDVGALARDQVLAFRRRVQPVFQNPYSSLDPMYSVFRAIEEPLRVHHVGDRRQRQRAVRELVDQVALPSSILGRRPRELSGGQRQRVAIARALALRPEVLVCDEAVSALDVLVQAQILDLLADLQADLGLTYLFISHDLAVIRQIADDVLVMRAGRVVEHASTEEVFSRPRHEYTRQLLQAIPGAPSAPRKVGNL

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




GOL_A_13(4FIN)
ETTA_ECOLI
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




110 HHSearch 85.7028%-112 - C2 -4F4C - PGP1_CAEEL -
109 HHSearch 80.8326%-108 - C2 -4FIN 3.1 ETTA_ECOLI
134 Fugue 78.1435%-122 - C2 -3TUZ - METN_ECOLI -
3 PsiBlast_PDB 72.0836%-125 - C2 -3TUZ - METN_ECOLI -
130 HHSearch 72.0136%-121 - C2 -1Z47 - ? -
2 PsiBlast_PDB 69.7436%-123 - C2 -3TUI - METN_ECOLI -
129 HHSearch 68.5833%-130 - C2 -4TQU - ? -
22 PsiBlast_CBE 68.1636%-117 - C2 -3TUZ - METN_ECOLI -
21 PsiBlast_CBE 67.5636%-125 - C2 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 67.4736%-123 - C2 -3TUI - METN_ECOLI -
141 Fugue 67.2729%-108 - C2 -1OXS - ? -
26 PsiBlast_CBE 66.9336%-118 - C2 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 66.9336%-118 - C2 -3TUI - METN_ECOLI -
27 PsiBlast_CBE 66.5435%-115 - C2 -2IT1 - ? -
5 PsiBlast_PDB 65.7835%-115 - C2 -2IT1 - ? -
23 PsiBlast_CBE 65.4036%-120 - C2 -3TUZ - METN_ECOLI -
1 PsiBlast_PDB 64.4036%-118 - C2 -3DHW - METN_ECOLI -
50 PsiBlast_CBE 63.9032%-110 - C2 -1OXU - ? -
47 PsiBlast_CBE 63.7032%-110 - C2 -1OXV - ? -
48 PsiBlast_CBE 63.2732%-107 - C2 -1OXU - ? -
54 PsiBlast_CBE 59.6231%-114 - C2 -4MKI 2.1 ECFA2_CALS4
57 PsiBlast_CBE 56.9232%-125 - C2 -1VCI 2.9 ?
53 PsiBlast_CBE 56.6231%-111 - C2 -4MKI 4.0 ECFA2_CALS4
106 PsiBlast_CBE 56.0437%-108 - C2 -3FVQ 5.7 FBPC_NEIG1
107 PsiBlast_CBE 54.9237%-107 - C2 -3FVQ 4.6 FBPC_NEIG1
61 PsiBlast_CBE 39.9436% -99 - C2 -4AYX 4.0 ABCBA_HUMAN
60 PsiBlast_CBE 38.9236% -98 - C2 -4AYW 4.3 ABCBA_HUMAN
68 PsiBlast_CBE 37.6631% -88 - C2 -2PMK 5.3
66 PsiBlast_CBE 37.6531% -86 - C2 -2FF7 5.0
62 PsiBlast_CBE 36.7636% -92 - C2 -4AYT 4.5 ABCBA_HUMAN