@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3696c: (2016-05-22 )
MSDAILGEQLAESSDFIAAIDQGTTSTRCMIFDHHGAEVARHQLEHEQILPRAGWVEHNPVEIWERTASVLISVLNATNLSPKDIAALGITNQRETTLVWNRHTGRPYYNAIVWQDTRTDRIASALDRDGRGNLIRRKAGLPPATYFSGGKLQWILENVDGVRAAAENGDALFGTPDTWVLWNLTGGPRGGVHVTDVTNASRTMLMDLETLDWDDELLSLFSIPRAMLPEIASSAPSEPYGVTLATGPVGGEVPITGVLGDQHAAMVGQVCLAPGEAKNTYGTGNFLLLNTGETIVRSNNGLLTTVCYQFGNAKPVYALEGSIAVTGSAVQWLRDQLGIISGAAQSEALARQVPDNGGMYFVPAFSGLFAPYWRSDARGAIVGLSRFNTNAHLARATLEAICYQSRDVVDAMEADSGVRLQVLKVDGGITGNDLCMQIQADVLGVDVVRPVVAETTALGVAYAAGLAVGFWAAPSDLRANWREDKRWTPTWDDDERAAGYAGWRKAVQRTLDWVDVS

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_G_6(1GLC)
GLPK_ECOLI
[Raw transfer]




ADP_G_6(1GLE)
GLPK_ECOLI
[Raw transfer]




ATS_Y_4(1GLJ)
GLPK_ECOLI
[Raw transfer]




ADP_G_5(1GLD)
GLPK_ECOLI
[Raw transfer]




ACP_Y_5(1GLL)
GLPK_ECOLI
[Raw transfer]




ATS_O_5(1GLJ)
GLPK_ECOLI
[Raw transfer]




ATF_Y_5(1BWF)
GLPK_ECOLI
[Raw transfer]




ACP_O_6(1GLL)
GLPK_ECOLI
[Raw transfer]




ATF_O_6(1BWF)
GLPK_ECOLI
[Raw transfer]




GOL_I_9(1BOT)
GLPK_ECOLI
[Raw transfer]




GOL_O_3(3D7E)
GLPK_ENTCA
[Raw transfer]




GOL_O_4(1BO5)
GLPK_ECOLI
[Raw transfer]




GOL_Z_5(1BO5)
GLPK_ECOLI
[Raw transfer]




GOL_O_8(3H3N)
GLPK_ENTCA
[Raw transfer]




GOL_G_9(1GLA)
GLPK_ECOLI
[Raw transfer]




GOL_O_3(3FLC)
GLPK_ENTCA
[Raw transfer]




GOL_O_7(3H46)
GLPK_ENTCA
[Raw transfer]




GOL_G_7(1BOT)
GLPK_ECOLI
[Raw transfer]




GOL_C_3(1XUP)
GLPK_ENTCA
[Raw transfer]




EDO_A_5(2W41)
?
[Raw transfer]




EDO_B_21(2W41)
?
[Raw transfer]




MPD_C_3(2D4W)
?
[Raw transfer]




MPD_C_3(2D4W)
?
[Raw transfer]




MPD_D_4(2D4W)
?
[Raw transfer]




EDO_A_9(2W41)
?
[Raw transfer]




EDO_B_25(2W41)
?
[Raw transfer]




21 PsiBlast_CBE 97.9462% -87 - C4 -2D4W 3.2 ?
100 HHSearch 97.5863% -87 - C4 -2D4W 3.9 ?
1 PsiBlast_PDB 97.2862% -87 - C4 -2D4W 3.9 ?
25 PsiBlast_CBE 92.9151% -86 - C4 -3EZW - GLPK_ECOLI -
26 PsiBlast_CBE 92.4251% -84 - C4 -3EZW - GLPK_ECOLI -
43 PsiBlast_CBE 91.4450% -82 - C4 -3H45 - GLPK_ENTCA -
11 PsiBlast_PDB 91.3751% -81 - C4 -1BO5 4.1 GLPK_ECOLI
50 PsiBlast_CBE 91.2650% -82 - C4 -3H3O - GLPK_ENTCA -
40 PsiBlast_CBE 91.2250% -81 - C4 -3H46 3.6 GLPK_ENTCA
93 HHSearch 91.1952% -82 - C4 -3EZW - GLPK_ECOLI -
15 PsiBlast_PDB 91.1950% -83 - C4 -3G25 - GLPK_STAAC -
48 PsiBlast_CBE 91.0950% -80 - C4 -3H3O - GLPK_ENTCA -
36 PsiBlast_CBE 91.0751% -82 - C4 -1BO5 2.7 GLPK_ECOLI
52 PsiBlast_CBE 91.0650% -79 - C4 -3H3N 3.5 GLPK_ENTCA
31 PsiBlast_CBE 90.9751% -80 - C4 -3EZW - GLPK_ECOLI -
3 PsiBlast_PDB 90.8751% -78 - C4 -3EZW - GLPK_ECOLI -
96 HHSearch 90.8251% -82 - C4 -3G25 - GLPK_STAAC -
22 PsiBlast_CBE 90.7951% -80 - C4 -1BU6 - GLPK_ECOLI -
95 HHSearch 90.6250% -79 - C4 -3H3N - GLPK_ENTCA -
41 PsiBlast_CBE 90.5550% -81 - C4 -3H45 - GLPK_ENTCA -
19 PsiBlast_PDB 89.9450% -79 - C4 -3D7E 3.6 GLPK_ENTCA
4 PsiBlast_PDB 89.8551% -81 - C4 -1GLA 2.4 GLPK_ECOLI
39 PsiBlast_CBE 89.8351% -82 - C4 -1BWF 5.7 GLPK_ECOLI
37 PsiBlast_CBE 89.6551% -83 - C4 -1GLL 5.3 GLPK_ECOLI
38 PsiBlast_CBE 89.5051% -83 - C4 -1GLJ 6.5 GLPK_ECOLI
46 PsiBlast_CBE 89.4950% -77 - C4 -3FLC 3.5 GLPK_ENTCA
35 PsiBlast_CBE 89.3951% -81 - C4 -1BOT 4.6 GLPK_ECOLI
10 PsiBlast_PDB 89.1051% -79 - C4 -1BOT 4.1 GLPK_ECOLI
6 PsiBlast_PDB 89.0751% -79 - C4 -1GLC 5.4 GLPK_ECOLI
13 PsiBlast_PDB 88.9951% -81 - C4 -1GLJ 6.2 GLPK_ECOLI
12 PsiBlast_PDB 88.7051% -80 - C4 -1BWF 5.6 GLPK_ECOLI
7 PsiBlast_PDB 88.4751% -79 - C4 -1GLD 6.1 GLPK_ECOLI
8 PsiBlast_PDB 88.0651% -80 - C4 -1GLE 5.0 GLPK_ECOLI
14 PsiBlast_PDB 87.8351% -80 - C4 -1GLL 5.0 GLPK_ECOLI
67 PsiBlast_CBE 86.5541% -86 - C4 -2W41 2.8 ?
68 PsiBlast_CBE 86.1841% -86 - C4 -2W41 3.1 ?
54 PsiBlast_CBE 80.4150% -71 - C4 -1XUP 2.5 GLPK_ENTCA