@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3708c: (2016-05-22 )
MGLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGATGVQLVDVPTPLAAAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLTADL

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3JN_A_9(4R5H)
?
[Raw transfer]




3JL_A_3(4R4J)
?
[Raw transfer]




NAP_B_11(4R4J)
?
[Raw transfer]




11C_A_3(3PWS)
?
[Raw transfer]




3JL_B_9(4R4J)
?
[Raw transfer]




12T_B_13(3PYX)
?
[Raw transfer]




NAP_A_5(4R3N)
?
[Raw transfer]




NAP_A_6(4R51)
?
[Raw transfer]




NAP_A_5(4R3N)
?
[Raw transfer]




NAP_A_4(4R4J)
?
[Raw transfer]




NAP_B_12(4R3N)
?
[Raw transfer]




11C_B_6(3PWS)
?
[Raw transfer]




3GQ_B_13(4R3N)
?
[Raw transfer]




NAP_A_10(4R5H)
?
[Raw transfer]




NAP_A_3(3PYX)
?
[Raw transfer]




3JM_A_7(4R54)
?
[Raw transfer]




NAP_A_4(3PZB)
?
[Raw transfer]




NAP_B_9(3PZB)
?
[Raw transfer]




NAP_B_9(3PYX)
?
[Raw transfer]




NAP_A_5(4R54)
?
[Raw transfer]




3GQ_A_6(4R3N)
?
[Raw transfer]




4NO_B_13(4R41)
?
[Raw transfer]




4NO_A_3(4R41)
?
[Raw transfer]




MLA_A_7(1YS4)
DHAS_METJA
[Raw transfer]




NAP_B_15(4R5H)
?
[Raw transfer]




NAP_B_15(4R51)
?
[Raw transfer]




NAP_B_9(4R54)
?
[Raw transfer]




2RA_A_3(3PZB)
?
[Raw transfer]




CYS_A_2(3TZ6)
DHAS_MYCTU
[Raw transfer]




NAP_A_3(3Q11)
?
[Raw transfer]




2RA_B_8(3PZB)
?
[Raw transfer]




NAP_B_14(4R41)
?
[Raw transfer]




NAP_B_9(3Q11)
?
[Raw transfer]




A2P_B_7(3PWS)
?
[Raw transfer]




NAP_A_4(4R41)
?
[Raw transfer]




25A_B_10(3PWK)
?
[Raw transfer]




CYS_A_3(3PZR)
DHAS1_VIBCH
[Raw transfer]




A2P_A_8(4R3W)
?
[Raw transfer]




A2P_A_5(3PWS)
?
[Raw transfer]




25A_A_3(3PWK)
?
[Raw transfer]




A2P_B_16(4R3W)
?
[Raw transfer]




DIO_A_8(2HJS)
USG_PSEAE
[Raw transfer]




DIO_A_8(2HJS)
USG_PSEAE
[Raw transfer]




2 PsiBlast_PDB 99.12100% -95 - C3 -3TZ6 - DHAS_MYCTU -
1 PsiBlast_PDB 98.87100% -96 - C3 -3VOS - DHAS_MYCTU -
73 HHSearch 98.5999% -95 - C3 -3TZ6 4.0 DHAS_MYCTU
3 PsiBlast_PDB 81.7941% -85 - C3 -2QZ9 - DHAS2_VIBCH -
17 PsiBlast_PDB 77.2139% -78 - C3 -4R3N 10.9 ?
26 PsiBlast_CBE 77.1639% -81 - C3 -4R51 10.4 ?
24 PsiBlast_CBE 76.9639% -79 - C3 -4R54 9.6 ?
81 HHSearch 76.6640% -73 * C3 *4R3N 10.7 ?
16 PsiBlast_PDB 76.6139% -81 - C3 -3Q1L - ? -
19 PsiBlast_PDB 76.5439% -79 - C3 -4R41 7.6 ?
10 PsiBlast_PDB 76.5139% -79 - C3 -3PWK 4.9 ?
39 PsiBlast_CBE 76.4339% -78 - C3 -3PWS 6.2 ?
27 PsiBlast_CBE 76.4239% -78 - C3 -4R4J 8.8 ?
6 PsiBlast_PDB 76.3039% -80 - C3 -2GYY - ? -
32 PsiBlast_CBE 76.2839% -82 - C3 -3Q1L - ? -
12 PsiBlast_PDB 76.2839% -81 - C3 -3PYL - ? -
28 PsiBlast_CBE 76.2639% -77 - C3 -4R41 8.3 ?
20 PsiBlast_PDB 76.2639% -75 - C3 -4R4J 9.7 ?
15 PsiBlast_PDB 76.2639% -78 - C3 -3Q11 7.7 ?
34 PsiBlast_CBE 76.2439% -78 - C3 -3Q11 6.4 ?
35 PsiBlast_CBE 76.2339% -79 - C3 -3PZB 11.0 ?
40 PsiBlast_CBE 76.2139% -77 - C3 -3PWK 6.6 ?
25 PsiBlast_CBE 76.1039% -78 - C3 -4R51 7.9 ?
14 PsiBlast_PDB 76.0739% -77 - C3 -3PZB 9.1 ?
30 PsiBlast_CBE 76.0239% -79 - C3 -4R3N 8.8 ?
13 PsiBlast_PDB 76.0039% -77 - C3 -3PYX 9.7 ?
11 PsiBlast_PDB 75.9639% -79 - C3 -3PWS 4.4 ?
22 PsiBlast_CBE 75.9039% -76 - C3 -4R5H 7.4 ?
36 PsiBlast_CBE 75.7239% -76 - C3 -3PYX 9.5 ?
18 PsiBlast_PDB 75.7239% -76 - C3 -4R3W 5.1 ?
21 PsiBlast_CBE 75.6239% -77 - C3 -4R5H 6.8 ?
23 PsiBlast_CBE 75.6039% -78 - C3 -4R54 7.2 ?
29 PsiBlast_CBE 74.9439% -77 - C3 -4R3W 7.1 ?
82 HHSearch 68.5233% -69 - C3 -2HJS 2.1 USG_PSEAE
63 Fugue 68.1133% -72 - C3 -2HJS 2.1 USG_PSEAE
85 HHSearch 60.3930% -61 - C3 -1YS4 3.7 DHAS_METJA