@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3710: (2016-05-22 )
MPVNRYRPFAEEVEPIRLRNRTWPDRVIDRAPLWCAVDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSASQTDFDFVREIIEQGAIPDDVTIQVLTQCRPELIERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIEGCLFGNGERTGNVCLVTLGLNLFSRGVDPQIDFSNIDEIRRTVEYCNQLPVHERHPYGGDLVYTAFSGSHQDAINKGLDAMKLDADAADCDVDDMLWQVPYLPIDPRDVGRTYEAVIRVNSQSGKGGVAYIMKTDHGLSLPRRLQIEFSQVIQKIAEGTAGEGGEVSPKEMWDAFAEEYLAPVRPLERIRQHVDAADDDGGTTSITATVKINGVETEISGSGNGPLAAFVHALADVGFDVAVLDYYEHAMSAGDDAQAAAYVEASVTIASPAQPGEAGRHASDPVTIASPAQPGEAGRHASDPVTSKTVWGVGIAPSITTASLRAVVSAVNRAAR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KIV_B_7(3U6W)
LEU1_MYCTU
[Raw transfer]



COI_B_9(3HPS)
LEU1_MYCTU
[Raw transfer]



GOL_B_9(3HQ1)
LEU1_MYCTU
[Raw transfer]



GOL_B_6(3HPX)
LEU1_MYCTU
[Raw transfer]



GOL_B_7(3FIG)
LEU1_MYCTU
[Raw transfer]



KIV_A_6(1SR9)
LEU1_MYCTU
[Raw transfer]



KIV_A_4(3U6W)
LEU1_MYCTU
[Raw transfer]



COI_A_6(3HPS)
LEU1_MYCTU
[Raw transfer]



VPM_A_3(4OV9)
?
[Raw transfer]



FLC_B_8(3HQ1)
LEU1_MYCTU
[Raw transfer]



BPV_B_8(3HPZ)
LEU1_MYCTU
[Raw transfer]
24 PsiBlast_CBE 99.03100%-109 * C2 *3HPS 3.3 LEU1_MYCTU
2 PsiBlast_PDB 98.98100%-109 - C2 -3HPS 3.1 LEU1_MYCTU
22 PsiBlast_CBE 98.97100%-109 - C2 -3HQ1 2.8 LEU1_MYCTU
21 PsiBlast_CBE 98.75100%-109 - C2 -3FIG 2.8 LEU1_MYCTU
23 PsiBlast_CBE 98.65100%-108 - C2 -3HPZ 3.4 LEU1_MYCTU
1 PsiBlast_PDB 98.00100%-108 - C2 -3FIG - LEU1_MYCTU -
54 Fugue 92.9092% -95 - C2 -1SR9 2.9 LEU1_MYCTU
25 PsiBlast_CBE 82.16100% -97 - C2 -3HPX 2.7 LEU1_MYCTU
3 PsiBlast_PDB 81.70100% -97 - C2 -3HPX - LEU1_MYCTU -
4 PsiBlast_PDB 81.48100% -99 - C2 -3U6W 2.8 LEU1_MYCTU
26 PsiBlast_CBE 81.46100% -99 - C2 -3U6W 2.8 LEU1_MYCTU
31 HHSearch 58.8026% -80 - C2 -4OV4 - ? -
55 Fugue 57.7826% -74 - C2 -4OV4 - ? -
33 HHSearch 54.9025% -76 - C2 -3RMJ - LEU1_NEIMB -
6 PsiBlast_PDB 54.0827% -64 - C2 -4OV9 3.7 ?
5 PsiBlast_PDB 53.3527% -64 - C2 -4OV4 - ? -
32 HHSearch 51.9321% -76 - C2 -2ZTJ - HOSC_THET2 -
34 HHSearch 50.6520% -77 - C2 -3IVS - HOSM_SCHPO -
35 HHSearch 48.2519% -66 - C2 -3BLE - ? -
42 HHSearch 44.6417% -58 - C2 -1YDN - ? -