@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3752c: (2016-05-22 )
MTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAPLEAFFARQRLG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_H_4(2B3J)
TADA_STAAM
[Raw transfer]

-

GOL_A_10(2B3J)
TADA_STAAM
[Raw transfer]




GOL_B_12(2B3J)
TADA_STAAM
[Raw transfer]




CHAIN_G_3(2B3J)
TADA_STAAM
[Raw transfer]

-

CHAIN_E_1(2B3J)
TADA_STAAM
[Raw transfer]

-

CHAIN_E_1(2B3J)
TADA_STAAM
[Raw transfer]

-

CHAIN_F_2(2B3J)
TADA_STAAM
[Raw transfer]

-

23 PsiBlast_CBE 92.7546%-117 - C3 -2B3J 8.6 TADA_STAAM
61 HHSearch 91.8647%-113 - C3 -2B3J 9.2 TADA_STAAM
22 PsiBlast_CBE 91.2546%-118 - C3 -2B3J 8.5 TADA_STAAM
1 PsiBlast_PDB 90.8246%-113 - C3 -2B3J 9.3 TADA_STAAM
59 HHSearch 89.6947%-120 * C3 *1Z3A - TADA_ECOLI -
24 PsiBlast_CBE 89.5946%-118 - C3 -1Z3A - TADA_ECOLI -
26 PsiBlast_CBE 88.9239%-118 - C3 -1WWR - TADA_AQUAE -
2 PsiBlast_PDB 88.6046%-116 - C3 -1Z3A - TADA_ECOLI -
25 PsiBlast_CBE 88.5539%-121 - C3 -1WWR - TADA_AQUAE -
62 HHSearch 88.5439%-119 - C3 -1WWR - TADA_AQUAE -
5 PsiBlast_PDB 88.1939%-120 - C3 -1WWR - TADA_AQUAE -
21 PsiBlast_CBE 87.7546%-113 - C3 -2B3J 9.2 TADA_STAAM
4 PsiBlast_PDB 87.3448%-120 - C3 -3OCQ - ? -
27 PsiBlast_CBE 87.0339%-119 - C3 -1WWR - TADA_AQUAE -
60 HHSearch 85.0940%-122 - C3 -2NX8 - TADA_STRP6 -
28 PsiBlast_CBE 83.3244%-121 - C3 -2A8N - TADA_AGRFC -
3 PsiBlast_PDB 79.2844%-131 - C3 -2NX8 - TADA_STRP6 -
9 PsiBlast_PDB 78.9427%-111 - C3 -3DH1 - ADAT2_HUMAN -
81 Fugue 78.8030%-113 - C3 -2B3Z - RIBD_BACSU -
6 PsiBlast_PDB 78.4044%-119 - C3 -2A8N - TADA_AGRFC -