@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3772: (2016-05-23 )
MTARLRPELAGLPVYVPGKTVPGAIKLASNETVFGPLPSVRAAIDRATDTVNRYPDNGCVQLKAALARHLGPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPLTDHTFDLYAMLATVTDRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAHILIAIDEAYVEYIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFTVSSIGQAAAIASLDAADELLARTDTVVAERARVSAELRAAGFTLPPSQANFVWLPLGSRTQDFVEQAADARIVVRPYGTDGVRVTVAAPEENDAFLRFARRWRSDQ

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMP_B_13(3CQ5)
HIS8_CORGL
[Raw transfer]



PMP_A_11(3CQ5)
HIS8_CORGL
[Raw transfer]



PMP_C_15(3CQ5)
HIS8_CORGL
[Raw transfer]



PLP_B_8(4R8D)
HIS8_MYCTU
[Raw transfer]



PLP_A_3(4R8D)
HIS8_MYCTU
[Raw transfer]



MES_B_9(4R8D)
HIS8_MYCTU
[Raw transfer]



MES_A_4(4R8D)
HIS8_MYCTU
[Raw transfer]



PMP_A_3(1UU2)
HIS8_THEMA
[Raw transfer]



144_C_14(3CQ5)
HIS8_CORGL
[Raw transfer]



PLP_A_4(4WBT)
?
[Raw transfer]



PLP_A_4(4WBT)
?
[Raw transfer]



144_A_10(3CQ5)
HIS8_CORGL
[Raw transfer]



HSA_E_5(1GEX)
HIS8_ECOLI
[Raw transfer]
46 HHSearch 98.24100%-131 - C1 -4R5Z - PATR_MYCTU -
1 PsiBlast_PDB 98.1299%-134 - C1 -4R2N - PATR_MYCTU -
23 PsiBlast_CBE 97.7699%-130 - C1 -4R5Z - PATR_MYCTU -
2 PsiBlast_PDB 97.5499%-130 - C1 -4R5Z - PATR_MYCTU -
21 PsiBlast_CBE 97.4799%-130 - C1 -4R5Z - PATR_MYCTU -
24 PsiBlast_CBE 97.0799%-133 - C1 -4R2N - PATR_MYCTU -
22 PsiBlast_CBE 96.9599%-131 - C1 -4R5Z - PATR_MYCTU -
26 PsiBlast_CBE 96.7999%-130 - C1 -4R2N - PATR_MYCTU -
25 PsiBlast_CBE 96.5999%-132 - C1 -4R2N - PATR_MYCTU -
8 PsiBlast_PDB 65.6627%-122 - C1 -3GET - HIS8_CAMJE -
51 HHSearch 65.1728%-121 - C1 -3GET - HIS8_CAMJE -
29 PsiBlast_CBE 64.9132%-104 - C1 -4R8D 4.5 HIS8_MYCTU
5 PsiBlast_PDB 64.0732%-105 - C1 -4R8D 4.5 HIS8_MYCTU
49 HHSearch 63.5029%-126 - C1 -3FFH - HIS8_LISIN -
53 HHSearch 62.3729%-109 - C1 -4R8D - HIS8_MYCTU -
4 PsiBlast_PDB 61.2831%-113 - C1 -3CQ5 4.9 HIS8_CORGL
50 HHSearch 60.9328%-112 - C1 -3CQ5 - HIS8_CORGL -
54 HHSearch 60.2627%-117 - C1 -3HDO - HIS8_GEOMG -
6 PsiBlast_PDB 60.1432%-105 - C1 -4RAE - HIS8_MYCTU -
27 PsiBlast_CBE 59.9931%-111 - C1 -3CQ5 5.4 HIS8_CORGL
28 PsiBlast_CBE 59.9331%-110 - C1 -3CQ5 5.3 HIS8_CORGL
11 PsiBlast_PDB 55.9730%-110 - C1 -1UU2 4.9 HIS8_THEMA
9 PsiBlast_PDB 39.3234% -86 - C1 -4WBT Error ?
55 HHSearch 28.7833% -60 - C1 -4WBT Error ?