@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3804c: (2016-05-23 )
MQLVDRVRGAVTGMSRRLVVGAVGAALVSGLVGAVGGTATAGAFSRPGLPVEYLQVPSPSMGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWEYWGAQLNAMKPDLQRALGATPNTGPAPQGA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SOG_C_3(1VA5)
A85C_MYCTU
[Raw transfer]



SOG_D_4(1VA5)
A85C_MYCTU
[Raw transfer]



GOL_B_8(3HRH)
A85C_MYCTU
[Raw transfer]



GOL_A_6(3HRH)
A85C_MYCTU
[Raw transfer]



GOL_B_18(3HRH)
A85C_MYCTU
[Raw transfer]



MPD_E_5(1F0P)
A85B_MYCTU
[Raw transfer]



TRE_C_3(1F0P)
A85B_MYCTU
[Raw transfer]



DEP_A_2(1DQY)
A85C_MYCTU
[Raw transfer]



MPD_C_3(1F0N)
A85B_MYCTU
[Raw transfer]



TRE_D_4(1F0P)
A85B_MYCTU
[Raw transfer]
23 HHSearch 91.53100% -84 - C1 -1SFR - A85A_MYCTU -
44 Fugue 86.4782% -81 - C1 -1F0N - A85B_MYCTU -
3 PsiBlast_PDB 85.9982% -81 - C1 -1F0N 2.5 A85B_MYCTU
2 PsiBlast_PDB 85.9882% -80 - C1 -1F0P 4.8 A85B_MYCTU
14 PsiBlast_PDB 84.7168% -82 - C1 -4MQL - A85C_MYCTU -
5 PsiBlast_PDB 84.6168% -81 - C1 -4QEK - A85C_MYCTU -
7 PsiBlast_PDB 84.2869% -79 - C1 -1DQY 4.0 A85C_MYCTU
24 HHSearch 83.3566% -82 - C1 -4MQL - A85C_MYCTU -
22 PsiBlast_CBE 82.4869% -79 - C1 -1VA5 5.2 A85C_MYCTU
10 PsiBlast_PDB 81.7568% -93 - C1 -4QE3 - A85C_MYCTU -
15 PsiBlast_PDB 81.5168% -87 - C1 -4QDX - A85C_MYCTU -
45 Fugue 81.3268% -80 - C1 -1DQZ - A85C_MYCTU -
9 PsiBlast_PDB 81.2069% -76 - C1 -1VA5 5.1 A85C_MYCTU
16 PsiBlast_PDB 81.0868% -81 - C1 -1DQZ - A85C_MYCTU -
4 PsiBlast_PDB 80.9769% -91 - C1 -4MQM - A85C_MYCTU -
13 PsiBlast_PDB 80.2568% -84 - C1 -4QDT - A85C_MYCTU -
6 PsiBlast_PDB 80.1468% -90 - C1 -4QDZ - A85C_MYCTU -
21 PsiBlast_CBE 79.4069% -81 - C1 -3HRH 3.2 A85C_MYCTU
8 PsiBlast_PDB 78.5369% -80 - C1 -3HRH 2.7 A85C_MYCTU
11 PsiBlast_PDB 73.1968% -72 - C1 -4QDO - A85C_MYCTU -