@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3808c: (2016-05-23 )
MSELAASLLSRVILPRPGEPLDVRKLYLEESTTNARRAHAPTRTSLQIGAESEVSFATYFNAFPASYWRRWTTCKSVVLRVQVTGAGRVDVYRTKATGARIFVEGHDFTGTEDQPAAVETEVVLQPFEDGGWVWFDITTDTAVTLHSGGWYATSPAPGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQPNLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLPGAAIWHMAWSDKDDAIDWQAYFHLRNRLVVAAMHWDGPKAQVIGLVRSHLKATLKHLACLEYSTVAIQNKAIDDFLAGPEHIFSILESALPQVHRIRKSYPDAVVLPAASELPPPLHKNKAMKPPVNPLVIGYRLARGIMHNLTAANPQHHRRPEFNVPTQDARWFLLCTVDGATVTTADGCGVVYRQRDRAKMFALLWQSLRRQRQLLKRFEEMRRIYRDALPTLSSKQKWETALLPAANQEPEHG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UDP_A_3(4FIY)
GLFT2_MYCTU
[Raw transfer]



UDP_B_6(4FIY)
GLFT2_MYCTU
[Raw transfer]



GOL_A_4(4FIX)
GLFT2_MYCTU
[Raw transfer]
37 Fugue 99.95100%-105 - C3 -4FIX 2.1 GLFT2_MYCTU
1 PsiBlast_PDB 99.35100%-105 - C3 -4FIX - GLFT2_MYCTU -
11 PsiBlast_CBE 98.68100%-104 - C3 -4FIX - GLFT2_MYCTU -
10 PsiBlast_CBE 98.32100%-103 - C3 -4FIY 3.4 GLFT2_MYCTU
2 PsiBlast_PDB 98.24100%-104 - C3 -4FIY 4.1 GLFT2_MYCTU
12 HHSearch 98.1597%-106 - C3 -4FIX - GLFT2_MYCTU -
38 Fugue 44.3814% -56 - C3 -4HG6 - ? -
17 HHSearch 40.7512% -71 - C3 -2D7I - GLT10_HUMAN -
15 HHSearch 40.6511% -63 - C3 -5AJO - GALT2_HUMAN -
23 HHSearch 40.5811% -49 - C3 -3ZF8 - MNN9_YEAST -
25 HHSearch 40.2813% -59 * C3 *4P02 - ? -
26 HHSearch 39.8316% -56 - C3 -2BO4 - MGS_RHOMR -
30 HHSearch 39.4616% -70 - C3 -1FO8 - MGAT1_RABIT -
14 HHSearch 39.1511% -71 - C3 -1XHB - GALT1_MOUSE -
20 HHSearch 38.4111% -61 - C3 -2NXV - YAT6_RHOBL -
35 HHSearch 38.2715% -32 - C3 -1V84 - B3GA1_HUMAN -
28 HHSearch 38.2711% -99 - C- -4IRP - B4GT7_HUMAN -
22 HHSearch 37.699% -48 - C3 -3CKJ - GPGS_MYCPA -
31 HHSearch 37.5014% -47 - C3 -2FY7 - B4GT1_HUMAN -
24 HHSearch 37.5011% -49 - C3 -3F1Y - ? -