@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3853: (2016-05-23 )
MAISFRPTADLVDDIGPDVRSCDLQFRQFGGRSQFAGPISTVRCFQDNALLKSVLSQPSAGGVLVIDGAGSLHTALVGDVIAELARSTGWTGLIVHGAVRDAAALRGIDIGIKALGTNPRKSTKTGAGERDVEITLGGVTFVPGDIAYSDDDGIIVV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TLA_V_22(1NXJ)
RRAAH_MYCTU
[Raw transfer]




TLA_S_19(1NXJ)
RRAAH_MYCTU
[Raw transfer]




TLA_S_19(1NXJ)
RRAAH_MYCTU
[Raw transfer]




TLA_Y_25(1NXJ)
RRAAH_MYCTU
[Raw transfer]




TLA_S_19(1NXJ)
RRAAH_MYCTU
[Raw transfer]




EDO_A_6(3C8O)
RRAAH_PSEAE
[Raw transfer]




EDO_A_18(3C8O)
RRAAH_PSEAE
[Raw transfer]




PGE_B_(3C8O)
RRAAH_PSEAE
[Raw transfer]




PGE_B_(3C8O)
RRAAH_PSEAE
[Raw transfer]




34 Fugue 98.41100%-135 - C3 -1NXJ 2.5 RRAAH_MYCTU
19 PsiBlast_CBE 98.3099%-133 - C3 -1NXJ 3.5 RRAAH_MYCTU
1 PsiBlast_PDB 98.2099%-135 - C3 -1NXJ 2.5 RRAAH_MYCTU
25 HHSearch 97.8499%-132 - C3 -1NXJ 2.5 RRAAH_MYCTU
18 PsiBlast_CBE 97.5299%-132 - C3 -1NXJ 3.5 RRAAH_MYCTU
20 PsiBlast_CBE 80.1044%-119 - C3 -3C8O - RRAAH_PSEAE -
2 PsiBlast_PDB 80.0844%-120 - C3 -3C8O 3.3 RRAAH_PSEAE
3 PsiBlast_PDB 79.0746%-119 - C3 -1J3L - RRAAH_THET8 -
30 HHSearch 78.9442%-117 - C3 -3C8O 3.3 RRAAH_PSEAE
6 PsiBlast_PDB 77.7245%-122 - C3 -1Q5X - RRAA_ECOLI -
24 HHSearch 77.5044%-117 - C3 -1J3L - RRAAH_THET8 -
27 HHSearch 77.4044%-119 - C3 -2PCN - ? -
8 PsiBlast_PDB 77.1245%-118 - C3 -2YJV - RRAA_ECOLI -
4 PsiBlast_PDB 76.9644%-123 - C3 -2PCN - ? -
7 PsiBlast_PDB 76.8945%-125 - C3 -2YJT - RRAA_ECOLI -
21 PsiBlast_CBE 76.2045%-121 - C3 -2YJV - RRAA_ECOLI -
29 HHSearch 75.9842%-118 * C3 *1Q5X - RRAA_ECOLI -
26 HHSearch 64.6227%-107 - C3 -3NOJ - HMGA_PSEP1 -
36 Fugue 64.0226%-111 - C3 -3NOJ - HMGA_PSEP1 -
5 PsiBlast_PDB 60.3647% -59 - C3 -1VI4 - RRAAH_VIBCH -