@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3914: (2016-05-24 )
MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_D_9(5E4W)
?
[Raw transfer]




MPD_B_5(2EIQ)
THIO_ECOLI
[Raw transfer]




MPD_A_11(2TRX)
THIO_ECOLI
[Raw transfer]




MPD_B_6(2TRX)
THIO_ECOLI
[Raw transfer]




MPD_A_14(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H76)
THIO_ECOLI
[Raw transfer]




MPD_D_13(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_B_5(2H6Z)
THIO_ECOLI
[Raw transfer]




MPD_G_11(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H72)
THIO_ECOLI
[Raw transfer]




MPD_B_5(2H72)
THIO_ECOLI
[Raw transfer]




MPD_A_11(2TRX)
THIO_ECOLI
[Raw transfer]




GOL_B_10(4AJ8)
?
[Raw transfer]




MPD_B_4(2H75)
THIO_ECOLI
[Raw transfer]




EDO_A_3(4POB)
?
[Raw transfer]




PX5_C_7(3O6T)
THIO_MYCTU
[Raw transfer]




MPD_B_5(2H70)
THIO_ECOLI
[Raw transfer]




EDO_A_3(4POB)
?
[Raw transfer]




EDO_A_3(4POB)
?
[Raw transfer]




MPD_B_8(2TRX)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H6X)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H73)
THIO_ECOLI
[Raw transfer]




MPD_E_9(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H6Z)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H70)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H71)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H74)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H6Y)
THIO_ECOLI
[Raw transfer]




BME_A_2(2I4A)
?
[Raw transfer]




BME_A_2(2I4A)
?
[Raw transfer]




2 PsiBlast_PDB 91.36100%-123 - C1 -2L59 - THIO_MYCTU -
3 PsiBlast_PDB 89.96100%-139 - C1 -2I1U - THIO_MYCTU -
1 PsiBlast_PDB 89.94100%-122 - C1 -2L4Q - THIO_MYCTU -
4 PsiBlast_PDB 88.7999%-143 - C1 -3NOF - ? -
22 PsiBlast_CBE 88.1699%-141 - C1 -3O6T 4.5 THIO_MYCTU
24 PsiBlast_CBE 88.0599%-140 - C1 -3NOF - ? -
23 PsiBlast_CBE 87.9299%-134 - C1 -3O6T - THIO_MYCTU -
5 PsiBlast_PDB 87.7499%-140 - C1 -3O6T - THIO_MYCTU -
6 PsiBlast_PDB 87.1587%-140 - C1 -4WXT - ? -
131 HHSearch 86.7687%-137 - C1 -4WXT - ? -
21 PsiBlast_CBE 86.7499%-143 - C1 -3O6T - THIO_MYCTU -
7 PsiBlast_PDB 83.8075%-139 - C1 -4POB 2.9 ?
136 HHSearch 81.8375%-136 - C1 -4POB 2.9 ?
25 PsiBlast_CBE 81.6875%-135 - C1 -4POB 2.8 ?
26 PsiBlast_CBE 77.8157%-140 - C1 -1NW2 - THIO_ALIAC -
28 PsiBlast_CBE 76.9457%-139 - C1 -1NW2 - THIO_ALIAC -
12 PsiBlast_PDB 76.9252%-135 - C1 -1T00 - THIO1_STRCO -
29 PsiBlast_CBE 76.5857%-130 - C1 -1NW2 - THIO_ALIAC -
9 PsiBlast_PDB 76.4057%-140 - C1 -1QUW - THIO_ALIAC -
32 PsiBlast_CBE 76.0857%-135 - C1 -1NW2 - THIO_ALIAC -
122 HHSearch 74.8450%-130 - C1 -2I4A 2.8 ?
70 PsiBlast_CBE 70.5053%-140 - C1 -2H6Z 2.7 THIO_ECOLI
37 PsiBlast_CBE 70.4556%-138 - C1 -2FCH 2.7 THIO_ECOLI
75 PsiBlast_CBE 70.2554%-131 - C1 -2I4A 2.8 ?
38 PsiBlast_CBE 69.8156%-133 - C1 -2FCH 2.9 THIO_ECOLI
49 PsiBlast_CBE 69.4654%-115 - C1 -2H74 2.6 THIO_ECOLI
36 PsiBlast_CBE 69.0756%-140 - C1 -2FCH 2.8 THIO_ECOLI
73 PsiBlast_CBE 68.9853%-137 - C1 -2H70 2.6 THIO_ECOLI
46 PsiBlast_CBE 68.7154%-137 - C1 -2H75 2.7 THIO_ECOLI
52 PsiBlast_CBE 68.6254%-129 - C1 -2TRX 4.2 THIO_ECOLI
67 PsiBlast_CBE 68.3954%-136 - C1 -2H72 3.1 THIO_ECOLI
53 PsiBlast_CBE 68.3254%-125 - C1 -2TRX 2.9 THIO_ECOLI
17 PsiBlast_PDB 68.3055%-125 - C1 -2H73 2.6 THIO_ECOLI
71 PsiBlast_CBE 67.6153%-122 - C1 -2H6Z 2.8 THIO_ECOLI
54 PsiBlast_CBE 67.5954%-121 - C1 -2H6X 3.4 THIO_ECOLI
45 PsiBlast_CBE 67.3054%-124 - C1 -2H76 4.2 THIO_ECOLI
19 PsiBlast_PDB 66.7656%-127 - C1 -2FCH 2.7 THIO_ECOLI
48 PsiBlast_CBE 66.5054%-125 - C1 -2H71 2.8 THIO_ECOLI
74 PsiBlast_CBE 65.6853%-124 - C1 -2H70 2.8 THIO_ECOLI
72 PsiBlast_CBE 65.6453%-120 - C1 -2H6Y 2.8 THIO_ECOLI
51 PsiBlast_CBE 65.2954%-126 - C1 -5E4W Error ?
66 PsiBlast_CBE 64.4354%-113 - C1 -2EIQ Error THIO_ECOLI
115 Fugue 58.7846%-111 - C1 -2TRX 2.8 THIO_ECOLI
106 PsiBlast_CBE 46.9143%-108 - C1 -4AJ8 2.7 ?