@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0002: (2015-12-17 )
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVVLEDAAEPGEITVPARKLMDICKSLPNDVLIDIRVEEQKLLVKAGRSRFTLSTLPANDFPTVEEGPGSLNFSIAQSKLRRLIDRTSFAMAQQDVRYYLNGMLLEVNGGTLRSVATDGHRLAMCSLDAQIPSQDRHQVIVPRKGILELARLLTEQDGEVGIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPRGGDKLVVGDRQQLREAFSRTAILSNEKYRGIRLQLSNGLLKIQANNPEQEEAEEEVQVEYNGGNLEIGFNVSYLLDVLGVIGTEQVRFILSDSNSSALVHEADNDDSAYVVMPMRL

Atome Classification :

(60 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PEG_B_7(4MJR)
DPO3B_ECOLI
[Raw transfer]




2VG_A_9(4OVF)
?
[Raw transfer]




2VF_A_3(4OVG)
?
[Raw transfer]




2VF_B_13(4OVG)
?
[Raw transfer]




2VG_B_15(4OVF)
?
[Raw transfer]




2VM_A_3(4PNW)
?
[Raw transfer]




2VD_A_7(4PNU)
?
[Raw transfer]




0LA_A_6(4MJR)
DPO3B_ECOLI
[Raw transfer]




2VE_A_7(4OVH)
?
[Raw transfer]




2VD_B_12(4PNU)
?
[Raw transfer]




2VM_B_7(4PNW)
?
[Raw transfer]




2J2_A_6(4N9A)
DPO3B_ECOLI
[Raw transfer]




SFK_A_9(4K3K)
DPO3B_ECOLI
[Raw transfer]




27R_A_3(4MJQ)
DPO3B_ECOLI
[Raw transfer]




4FC_A_3(4N98)
DPO3B_ECOLI
[Raw transfer]




27O_B_9(4MJP)
DPO3B_ECOLI
[Raw transfer]




743_A_3(3QSB)
DPO3B_ECOLI
[Raw transfer]




PHE_A_4(4K3L)
DPO3B_ECOLI
[Raw transfer]




743_B_4(3QSB)
DPO3B_ECOLI
[Raw transfer]




PHE_B_13(4K3L)
DPO3B_ECOLI
[Raw transfer]




6NI_A_3(4N96)
DPO3B_ECOLI
[Raw transfer]




CHAIN_H_7(3Q4J)
DPO3B_ECOLI
[Raw transfer]

-

2HU_A_3(4N97)
DPO3B_ECOLI
[Raw transfer]




322_A_3(3D1G)
DPO3B_ECOLI
[Raw transfer]




322_B_4(3D1G)
DPO3B_ECOLI
[Raw transfer]




CHAIN_C_3(3Q4K)
DPO3B_ECOLI
[Raw transfer]

-

2HO_A_3(4N94)
DPO3B_ECOLI
[Raw transfer]




LEU_A_3(4K3L)
DPO3B_ECOLI
[Raw transfer]




LEU_B_12(4K3L)
DPO3B_ECOLI
[Raw transfer]




2HQ_A_7(4N95)
DPO3B_ECOLI
[Raw transfer]




CHAIN_D_4(3Q4K)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_E_3(4K3M)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_C_3(4K74)
?
[Raw transfer]

-

ACE_A_11(4K3L)
DPO3B_ECOLI
[Raw transfer]




CHAIN_R_4(4TSZ)
?
[Raw transfer]

-

CHAIN_X_14(4TSZ)
?
[Raw transfer]

-

CHAIN_C_3(1OK7)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_U_10(4TSZ)
?
[Raw transfer]

-

CHAIN_Q_2(4TSZ)
?
[Raw transfer]

-

CHAIN_D_4(4K74)
?
[Raw transfer]

-

CHAIN_T_8(4TSZ)
?
[Raw transfer]

-

CHAIN_Z_18(4TSZ)
?
[Raw transfer]

-

CHAIN_S_6(4TSZ)
?
[Raw transfer]

-

CHAIN_P_3(3D1E)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_Y_16(4TSZ)
?
[Raw transfer]

-

CHAIN_V_12(4TSZ)
?
[Raw transfer]

-

CHAIN_P_3(3D1F)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_Q_4(3D1F)
DPO3B_ECOLI
[Raw transfer]

-

ACE_B_26(4K3L)
DPO3B_ECOLI
[Raw transfer]




CHAIN_K_10(3Q4J)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_E_3(4K3P)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_E_3(4K3O)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_J_9(3Q4J)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_D_4(3Q4L)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_E_3(4K3Q)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_C_3(3Q4L)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_L_11(3Q4J)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_E_3(4K3R)
DPO3B_ECOLI
[Raw transfer]

-

CHAIN_I_8(3Q4J)
DPO3B_ECOLI
[Raw transfer]

-

24 PsiBlast_CBE 96.96100%-135 - C5 -4TSZ - ? -
32 PsiBlast_CBE 96.83100%-136 - C5 -4TSZ 8.9 ?
28 PsiBlast_CBE 96.69100%-136 - C5 -4TSZ 8.7 ?
31 PsiBlast_CBE 96.68100%-136 - C5 -4TSZ 8.7 ?
25 PsiBlast_CBE 96.66100%-137 - C5 -4TSZ - ? -
33 PsiBlast_CBE 96.55100%-136 - C5 -4TSZ 8.7 ?
34 PsiBlast_CBE 96.49100%-136 - C5 -4TSZ 8.8 ?
35 PsiBlast_CBE 96.47100%-136 - C5 -4TSZ 8.5 ?
1 PsiBlast_PDB 96.44100%-136 - C5 -4TSZ 8.7 ?
27 PsiBlast_CBE 96.35100%-136 - C5 -4TSZ - ? -
29 PsiBlast_CBE 96.31100%-136 - C5 -4TSZ 8.9 ?
26 PsiBlast_CBE 96.22100%-136 - C5 -4TSZ - ? -
30 PsiBlast_CBE 96.15100%-135 - C5 -4TSZ 8.8 ?
2 PsiBlast_PDB 95.46100%-135 - C5 -4TR8 - ? -
65 PsiBlast_CBE 83.6255%-126 - C5 -4MJQ 5.2 DPO3B_ECOLI
16 PsiBlast_PDB 83.5055%-133 - C5 -4K3L 3.1 DPO3B_ECOLI
81 PsiBlast_CBE 83.4355%-130 - C5 -3Q4K 7.8 DPO3B_ECOLI
66 PsiBlast_CBE 83.1655%-134 - C5 -4MJP 5.8 DPO3B_ECOLI
14 PsiBlast_PDB 83.1655%-134 - C5 -3Q4K 7.1 DPO3B_ECOLI
3 PsiBlast_PDB 83.1355%-131 - C5 -3Q4L 9.1 DPO3B_ECOLI
41 PsiBlast_CBE 82.9955%-132 - C5 -4PNU 5.3 ?
48 PsiBlast_CBE 82.9055%-130 - C5 -4OVF 5.1 ?
53 PsiBlast_CBE 82.8355%-133 - C5 -4N98 4.8 DPO3B_ECOLI
46 PsiBlast_CBE 82.7955%-128 - C5 -4OVG 5.2 ?
50 PsiBlast_CBE 82.7455%-131 - C5 -4N9A 4.6 DPO3B_ECOLI
42 PsiBlast_CBE 82.7355%-132 - C5 -4PNU 6.5 ?
18 PsiBlast_PDB 82.6655%-129 - C5 -4K3O 5.6 DPO3B_ECOLI
17 PsiBlast_PDB 82.4555%-128 - C5 -4K3M 4.4 DPO3B_ECOLI
36 PsiBlast_CBE 82.4055%-128 - C5 -3Q4L 8.0 DPO3B_ECOLI
20 PsiBlast_PDB 82.4055%-130 - C5 -4K3Q 5.8 DPO3B_ECOLI
69 PsiBlast_CBE 82.2555%-132 - C5 -4K74 5.1 ?
83 PsiBlast_CBE 82.2355%-131 - C5 -3Q4J 7.9 DPO3B_ECOLI
63 PsiBlast_CBE 82.1855%-125 - C5 -4MJR 4.3 DPO3B_ECOLI
45 PsiBlast_CBE 82.1255%-126 - C5 -4OVG 3.7 ?
73 PsiBlast_CBE 82.1155%-128 - C5 -4K3R 5.5 DPO3B_ECOLI
84 PsiBlast_CBE 82.0955%-127 - C5 -3Q4J 7.8 DPO3B_ECOLI
80 PsiBlast_CBE 81.9855%-126 - C5 -3QSB 5.7 DPO3B_ECOLI
57 PsiBlast_CBE 81.9655%-127 - C5 -4N96 3.7 DPO3B_ECOLI
10 PsiBlast_PDB 81.9555%-126 - C5 -3D1E 6.7 DPO3B_ECOLI
78 PsiBlast_CBE 81.9355%-128 - C5 -4K3L 3.0 DPO3B_ECOLI
86 PsiBlast_CBE 81.9255%-128 - C5 -3Q4J 7.7 DPO3B_ECOLI
15 PsiBlast_PDB 81.8355%-126 - C5 -4K3K 3.8 DPO3B_ECOLI
68 PsiBlast_CBE 81.8255%-129 - C5 -4K74 4.7 ?
59 PsiBlast_CBE 81.7855%-125 - C5 -4N95 3.6 DPO3B_ECOLI
87 PsiBlast_CBE 81.7755%-127 - C5 -3D1G 4.7 DPO3B_ECOLI
62 PsiBlast_CBE 81.7055%-126 - C5 -4MJR Error DPO3B_ECOLI
88 PsiBlast_CBE 81.6155%-124 - C5 -3D1F 5.9 DPO3B_ECOLI
55 PsiBlast_CBE 81.5055%-122 - C5 -4N97 4.0 DPO3B_ECOLI
82 PsiBlast_CBE 81.4455%-128 - C5 -3Q4J 7.3 DPO3B_ECOLI
19 PsiBlast_PDB 81.4155%-130 - C5 -4K3P 6.6 DPO3B_ECOLI
61 PsiBlast_CBE 81.3155%-124 - C5 -4N94 3.6 DPO3B_ECOLI
90 PsiBlast_CBE 81.2655%-125 - C5 -1OK7 6.4 DPO3B_ECOLI
11 PsiBlast_PDB 81.2355%-125 - C5 -3D1F 6.1 DPO3B_ECOLI
44 PsiBlast_CBE 81.0955%-128 - C5 -4OVH 5.6 ?
4 PsiBlast_PDB 80.9855%-125 - C5 -3QSB 5.7 DPO3B_ECOLI
85 PsiBlast_CBE 80.9655%-127 - C5 -3Q4J 7.7 DPO3B_ECOLI
47 PsiBlast_CBE 80.9155%-131 - C5 -4OVF 4.5 ?
38 PsiBlast_CBE 80.7255%-126 - C5 -4PNW 4.4 ?
12 PsiBlast_PDB 80.6555%-125 - C5 -3D1G 5.2 DPO3B_ECOLI
37 PsiBlast_CBE 80.1755%-130 - C5 -4PNW 5.2 ?