@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0036: (2015-12-19 )
MTSYRNGPDAKGLFGRFGGQYVAETLMPLILDLAREYEKAKDDPAFQEELAYFQRDYVGRPSPLYFAERLTEHCGGAKIYLKREELNHTGAHKINNCIGQILLARRMGKKRIIAETGAGMHGVATATVAARFGLQCVIYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEALRDWVTNVDSTFYLIGTVAGPHPYPAMVRDFQAVIGKETREQLAEKEGRLPDSLVACIGGGSNAMGLFHPFLDDAGVQIVGVEAAGHGIDTGKHAASLNGGVPGVLHGNRTFLLQDADGQIIDAHSISAGLDYPGIGPEHAWLHDTGRVEYTSITDDEALEAFHTCCRLEGIIPALESSHALAEVFKRAPSLPKEHIMVVNLSGRGDKDMQTVMHHMQQESKA

Atome Classification :

(71 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1D0_B_5(4HPJ)
TRPB_SALTY
[Raw transfer]




AQ3_B_8(4KKX)
TRPB_SALTY
[Raw transfer]




PLS_B_4(2CLM)
TRPB_SALTY
[Raw transfer]




7MN_B_4(3PR2)
TRPB_SALTY
[Raw transfer]




PLS_B_4(2CLO)
TRPB_SALTY
[Raw transfer]




PLS_B_4(2CLL)
TRPB_SALTY
[Raw transfer]




PLS_B_4(1KFE)
TRPB_SALTY
[Raw transfer]




PLS_B_4(1KFJ)
TRPB_SALTY
[Raw transfer]




PLS_B_5(2TSY)
TRPB_SALTY
[Raw transfer]




PLS_B_5(2TRS)
TRPB_SALTY
[Raw transfer]




0JO_B_8(4HPX)
TRPB_SALTY
[Raw transfer]




P1T_B_4(2J9X)
TRPB_SALTY
[Raw transfer]




0JO_B_4(4HN4)
TRPB_SALTY
[Raw transfer]




FOO_B_3(2J9Y)
TRPB_SALTY
[Raw transfer]




PLT_B_4(2TYS)
TRPB_SALTY
[Raw transfer]




PLS_B_9(1BEU)
TRPB_SALTY
[Raw transfer]




PLT_B_4(2TYS)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1A5S)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1UBS)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1KFC)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1K8X)
TRPB_SALTY
[Raw transfer]




PLP_B_5(2RH9)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1K8Z)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1TJP)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1K7E)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1K8Y)
TRPB_SALTY
[Raw transfer]




PLP_B_7(1A5A)
TRPB_SALTY
[Raw transfer]




PLP_A_4(2DH5)
TRPB_ECOLI
[Raw transfer]




PLP_B_9(1A5B)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1KFK)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1K7X)
TRPB_SALTY
[Raw transfer]




PLP_B_5(2CLH)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1K3U)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1FUY)
TRPB_SALTY
[Raw transfer]




PLP_B_12(4HT3)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1A50)
TRPB_SALTY
[Raw transfer]




PLP_B_6(1TTQ)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1KFB)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1BKS)
TRPB_SALTY
[Raw transfer]




PLP_B_5(2CLE)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1QOP)
TRPB_SALTY
[Raw transfer]




PLP_B_3(2J9Z)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1QOQ)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1WBJ)
TRPB_SALTY
[Raw transfer]




PLP_B_4(2CLK)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1CX9)
TRPB_SALTY
[Raw transfer]




PLP_B_7(1K7F)
TRPB_SALTY
[Raw transfer]




PLP_B_5(2CLI)
TRPB_SALTY
[Raw transfer]




PLP_B_4(2WSY)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1TTP)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1C9D)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1C29)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1C8V)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1CW2)
TRPB_SALTY
[Raw transfer]




EDO_B_13(4HT3)
TRPB_SALTY
[Raw transfer]




F6F_B_4(2CLF)
TRPB_SALTY
[Raw transfer]




PLP_B_7(3CEP)
TRPB_SALTY
[Raw transfer]




103 HHSearch 95.2661% -80 - C2 -1X1Q - TRPB_THET2 -
1 PsiBlast_PDB 94.8060% -83 - C2 -1X1Q - TRPB_THET2 -
2 PsiBlast_PDB 92.0161% -98 - C2 -4NEG - TRPB_BACAN -
4 PsiBlast_PDB 91.7960% -78 - C2 -1WDW - TRPB1_PYRFU -
25 PsiBlast_CBE 91.5060% -79 - C2 -1WDW - TRPB1_PYRFU -
24 PsiBlast_CBE 91.3460% -80 - C2 -1WDW - TRPB1_PYRFU -
28 PsiBlast_CBE 91.2060% -80 - C2 -1WDW - TRPB1_PYRFU -
23 PsiBlast_CBE 91.1960% -78 - C2 -1V8Z - TRPB1_PYRFU -
27 PsiBlast_CBE 91.0960% -79 - C2 -1WDW - TRPB1_PYRFU -
22 PsiBlast_CBE 90.8460% -76 - C2 -1V8Z - TRPB1_PYRFU -
26 PsiBlast_CBE 90.8060% -79 - C2 -1WDW - TRPB1_PYRFU -
21 PsiBlast_CBE 90.7160% -76 - C2 -1V8Z - TRPB1_PYRFU -
104 HHSearch 90.6659% -99 - C2 -2O2E - TRPB_MYCTU -
3 PsiBlast_PDB 90.6060% -77 - C2 -1V8Z - TRPB1_PYRFU -
5 PsiBlast_PDB 89.9660% -98 - C2 -2O2E - TRPB_MYCTU -
66 PsiBlast_CBE 89.7956% -79 - C2 -1FUY 5.3 TRPB_SALTY
42 PsiBlast_CBE 89.6356% -75 - C2 -1KFC 5.1 TRPB_SALTY
11 PsiBlast_PDB 89.4856% -76 - C2 -2CLM 8.4 TRPB_SALTY
33 PsiBlast_CBE 89.4256% -79 - C2 -1A5A 5.5 TRPB_SALTY
43 PsiBlast_CBE 89.2956% -76 - C2 -1K8X 5.2 TRPB_SALTY
46 PsiBlast_CBE 89.2856% -75 - C2 -2CLL 8.6 TRPB_SALTY
49 PsiBlast_CBE 89.2456% -75 - C2 -1WBJ 5.3 TRPB_SALTY
47 PsiBlast_CBE 89.2456% -75 - C2 -2CLK 5.3 TRPB_SALTY
50 PsiBlast_CBE 89.0256% -74 - C2 -1TJP 4.8 TRPB_SALTY
35 PsiBlast_CBE 88.9856% -77 - C2 -4HT3 4.9 TRPB_SALTY
31 PsiBlast_CBE 88.9256% -76 - C2 -1BEU 6.8 TRPB_SALTY
51 PsiBlast_CBE 88.9156% -74 - C2 -1QOP 5.1 TRPB_SALTY
56 PsiBlast_CBE 88.8056% -75 - C2 -1KFE 8.5 TRPB_SALTY
67 PsiBlast_CBE 88.7556% -78 - C2 -2J9Z 5.1 TRPB_SALTY
12 PsiBlast_PDB 88.7556% -74 - C2 -2CLO 8.5 TRPB_SALTY
48 PsiBlast_CBE 88.7156% -77 - C2 -2CLI 4.5 TRPB_SALTY
40 PsiBlast_CBE 88.6756% -76 - C2 -1KFK 4.4 TRPB_SALTY
55 PsiBlast_CBE 88.6456% -74 - C2 -1K3U 4.5 TRPB_SALTY
52 PsiBlast_CBE 88.6456% -77 - C2 -1KFB 4.8 TRPB_SALTY
54 PsiBlast_CBE 88.6156% -74 - C2 -1K7E 4.5 TRPB_SALTY
15 PsiBlast_PDB 88.5456% -78 - C2 -1TTQ 3.8 TRPB_SALTY
7 PsiBlast_PDB 88.5256% -76 - C2 -1A50 4.3 TRPB_SALTY
10 PsiBlast_PDB 88.5156% -76 - C2 -2CLH 4.1 TRPB_SALTY
68 PsiBlast_CBE 88.4656% -79 - C2 -1QOQ 5.1 TRPB_SALTY
13 PsiBlast_PDB 88.4356% -75 - C2 -2CLF 4.5 TRPB_SALTY
44 PsiBlast_CBE 88.4156% -73 - C2 -3CEP 10.7 TRPB_SALTY
61 PsiBlast_CBE 88.4056% -75 - C2 -1K7X 4.8 TRPB_SALTY
57 PsiBlast_CBE 88.2856% -73 - C2 -3PR2 10.8 TRPB_SALTY
41 PsiBlast_CBE 88.2656% -73 - C2 -1KFJ 8.3 TRPB_SALTY
9 PsiBlast_PDB 88.2556% -78 - C2 -2CLE 4.9 TRPB_SALTY
19 PsiBlast_PDB 88.2356% -74 - C2 -1CW2 4.9 TRPB_SALTY
70 PsiBlast_CBE 88.1255% -76 - C2 -2DH5 4.6 TRPB_ECOLI
58 PsiBlast_CBE 88.1056% -74 - C2 -2J9Y 8.7 TRPB_SALTY
39 PsiBlast_CBE 87.9456% -74 - C2 -2RH9 5.0 TRPB_SALTY
20 PsiBlast_PDB 87.9456% -76 - C2 -1CX9 4.7 TRPB_SALTY
18 PsiBlast_PDB 87.9456% -75 - C2 -1C9D 4.5 TRPB_SALTY
30 PsiBlast_CBE 87.9256% -74 - C2 -1C29 4.5 TRPB_SALTY
32 PsiBlast_CBE 87.7256% -79 - C2 -1A5B 5.3 TRPB_SALTY
60 PsiBlast_CBE 87.6556% -73 * C2 *1K8Y 4.8 TRPB_SALTY
37 PsiBlast_CBE 87.6256% -72 - C2 -4HPJ 10.6 TRPB_SALTY
64 PsiBlast_CBE 87.5856% -74 - C2 -1UBS 6.3 TRPB_SALTY
59 PsiBlast_CBE 87.5856% -76 - C2 -1K8Z 5.1 TRPB_SALTY
29 PsiBlast_CBE 87.5456% -73 - C2 -1C8V 4.5 TRPB_SALTY
53 PsiBlast_CBE 87.5156% -81 - C2 -1K7F 4.0 TRPB_SALTY
16 PsiBlast_PDB 87.4156% -74 - C2 -1A5S 6.5 TRPB_SALTY
14 PsiBlast_PDB 87.3556% -79 - C2 -1TTP 3.8 TRPB_SALTY
8 PsiBlast_PDB 87.2256% -83 - C2 -2WSY 4.3 TRPB_SALTY
36 PsiBlast_CBE 87.1456% -71 - C2 -4HPX 9.3 TRPB_SALTY
17 PsiBlast_PDB 87.1056% -76 - C2 -1BKS 4.7 TRPB_SALTY
45 PsiBlast_CBE 86.8756% -72 - C2 -2J9X 7.9 TRPB_SALTY
38 PsiBlast_CBE 86.8156% -71 - C2 -4HN4 8.7 TRPB_SALTY
34 PsiBlast_CBE 86.7956% -71 - C2 -4KKX 10.1 TRPB_SALTY
62 PsiBlast_CBE 86.3656% -72 - C2 -2TSY 7.2 TRPB_SALTY
65 PsiBlast_CBE 86.2856% -70 - C2 -2TYS 9.9 TRPB_SALTY
63 PsiBlast_CBE 86.1556% -75 - C2 -2TRS 7.2 TRPB_SALTY
123 Fugue 82.5751% -66 - C2 -2TYS 7.7 TRPB_SALTY