@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0179: (2015-12-25 )
MGKPILIVDDSASIRQMLSFTLKSAGYEVDEAADGKEGLGKAQSKSYSLVFTDQNMPNMDGLSLIRSLRNLAGYRSVPILMLTTESSDAMKQQGRSAGATGWLVKPFDPPKLLEVTRKVLP

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_8(3FFX)
CHEY_ECOLI
[Raw transfer]




GOL_A_6(3OO0)
CHEY_ECOLI
[Raw transfer]




WO4_B_16(3RVS)
CHEY_ECOLI
[Raw transfer]




GOL_A_8(3OLW)
CHEY_ECOLI
[Raw transfer]




GOL_B_17(3OLW)
CHEY_ECOLI
[Raw transfer]




WO4_A_4(3RVS)
CHEY_ECOLI
[Raw transfer]




GOL_A_5(3OLX)
CHEY_ECOLI
[Raw transfer]




1 PsiBlast_PDB 95.0353%-107 - C2 -4H60 - ? -
2 PsiBlast_PDB 91.5553%-112 - C2 -4HNR - ? -
8 PsiBlast_PDB 84.0138%-110 - C2 -6CHY - CHEY_ECOLI -
21 PsiBlast_CBE 82.6339%-107 - C2 -3OO1 - CHEY_ECOLI -
76 PsiBlast_CBE 81.9635% -96 - C2 -3DGE - ? -
22 PsiBlast_CBE 81.7339%-100 - C2 -3OO0 - CHEY_ECOLI -
4 PsiBlast_PDB 81.6939% -99 - C2 -3OO0 3.1 CHEY_ECOLI
6 PsiBlast_PDB 81.6139% -98 - C2 -3MYY - CHEY_ECOLI -
3 PsiBlast_PDB 81.0739% -96 - C2 -5CHY - CHEY_ECOLI -
86 PsiBlast_CBE 80.6338% -91 - C2 -3H1E - CHEY_HELPY -
5 PsiBlast_PDB 80.5439%-105 - C2 -3OO1 - CHEY_ECOLI -
12 PsiBlast_PDB 80.1538% -96 - C2 -1D4Z - CHEY_ECOLI -
77 PsiBlast_CBE 80.1235% -90 - C2 -3DGE - ? -
42 PsiBlast_CBE 80.1238%-107 - C2 -1A0O - CHEY_ECOLI -
36 PsiBlast_CBE 80.0838% -99 - C2 -1FFS - CHEY_ECOLI -
43 PsiBlast_CBE 79.9438%-102 - C2 -1A0O - CHEY_ECOLI -
75 PsiBlast_CBE 79.8936%-102 - C2 -3RVL - CHEY_ECOLI -
61 PsiBlast_CBE 79.8538%-104 - C2 -1YMV - CHEY_ECOLI -
9 PsiBlast_PDB 79.7738%-100 - C2 -3OLX 2.5 CHEY_ECOLI
51 PsiBlast_CBE 79.6836%-104 - C2 -2CHE - CHEY_SALTY -
24 PsiBlast_CBE 79.6339%-100 - C2 -3OLW 2.9 CHEY_ECOLI
7 PsiBlast_PDB 79.3139% -96 - C2 -3OLW 2.3 CHEY_ECOLI
72 PsiBlast_CBE 78.0336%-101 - C2 -3RVS 2.7 CHEY_ECOLI
71 PsiBlast_CBE 77.4836% -97 - C2 -3RVS 2.7 CHEY_ECOLI
68 PsiBlast_CBE 76.6536% -99 - C2 -3FFX 2.8 CHEY_ECOLI