@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0183: (2015-12-25 )
MSKRPNFLVIVADDLGFSDIGAFGGEIATPNLDALAIAGLRLTDFHTASTCSPTRSMLLTGTDHHIAGIGTMAEALTPELEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVTGWELFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQPGKLAELIEHWKRYVSETGVVEGASPFLVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

62Y_B_6(4CXU)
?
[Raw transfer]



62Y_A_4(4CXU)
?
[Raw transfer]



SV7_A_4(4CYS)
ARS_PSEAE
[Raw transfer]



SV7_A_5(4CXS)
?
[Raw transfer]



SV7_B_10(4CYS)
ARS_PSEAE
[Raw transfer]



SV7_B_11(4CXS)
?
[Raw transfer]



PEG_A_6(4CYS)
ARS_PSEAE
[Raw transfer]



PEG_A_4(4CYR)
ARS_PSEAE
[Raw transfer]
4 PsiBlast_PDB 99.5898% -85 - C4 -4CYS 3.0 ARS_PSEAE
24 PsiBlast_CBE 99.0398% -86 - C4 -4CYS 2.4 ARS_PSEAE
25 PsiBlast_CBE 98.8198% -85 - C4 -4CXK - ARS_PSEAE -
5 PsiBlast_PDB 98.6398% -84 - C4 -4CXK - ARS_PSEAE -
2 PsiBlast_PDB 98.3198% -84 - C4 -4CYR 2.2 ARS_PSEAE
21 PsiBlast_CBE 98.2898% -84 - C4 -4CYR - ARS_PSEAE -
23 PsiBlast_CBE 98.2598% -86 - C4 -4CXS 2.4 ?
1 PsiBlast_PDB 98.1498% -86 - C4 -4CXU 4.9 ?
22 PsiBlast_CBE 98.0998% -86 - C4 -4CXU 3.5 ?
3 PsiBlast_PDB 97.7198% -85 - C4 -4CXS 2.4 ?
6 PsiBlast_PDB 63.5725% -76 - C4 -3ED4 - ? -
11 PsiBlast_PDB 62.9422% -63 - C4 -4UPL - ? -
43 HHSearch 62.8829% -62 - C4 -3ED4 - ? -
69 Fugue 62.3928% -53 - C4 -1E3C - ARSA_HUMAN -
47 HHSearch 59.9122% -62 - C4 -3B5Q - ? -
13 PsiBlast_PDB 54.5222% -57 - C4 -4UPK - ? -
50 HHSearch 53.7721% -70 * C4 *3LXQ - ? -
70 Fugue 49.8915% -54 - C4 -2W5Q - LTAS_STAAW -
52 HHSearch 47.7516% -63 - C4 -2W8D - LTAS2_BACSU -
12 PsiBlast_PDB 47.5225% -74 - C4 -4UPH - ? -