@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0240: (2015-12-27 )
MSHPSHVRALCASLCLGAGLPVHAGHVHAGQGFLEDAKASLTARNFHLHRNFVGDASQGKAEEWTQSFILDARSGFTQGSVGFGLDVLGLYSLKLDGGKGTAGTQLLPIHDDGRPADDFGRLAVAGKLRVSNSELKIGEWMPVLPILRSDDGRSLPQTFRGGQLSANEIAGLTLYAGQFRGNSPRNDASMQDMSLFGRPAATSDRFDFAGGEYRFNGERSLLGLWNAELKDIYRQQYLQLQHSQPLGDWLLGANLGGFRGRDAGSARAGKLDNRTVSALFSARYGLHTLYLGLQKVSGDDGWMRVNGTSGGTLANDSYNASYDNPGERSWQLRYDFDFVGLGLPGLTFMTRYLHGDHVRLAGVTDDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRRDWGSNTRFDENRLIVSYPLSLL

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C8E_B_5(3SZD)
?
[Raw transfer]



C8E_B_9(4FMS)
?
[Raw transfer]



C8E_B_5(3SZD)
?
[Raw transfer]



C8E_A_5(4FRX)
?
[Raw transfer]



C8E_B_5(2QTK)
?
[Raw transfer]



C8E_A_9(2Y2X)
?
[Raw transfer]



C8E_A_9(3SYS)
?
[Raw transfer]



C8E_A_9(2Y2X)
?
[Raw transfer]



C8E_A_6(4FSP)
?
[Raw transfer]



C8E_B_9(4FRX)
?
[Raw transfer]



C8E_A_4(2Y0H)
?
[Raw transfer]



C8E_A_5(4FT6)
?
[Raw transfer]



C8E_B_24(3SYS)
?
[Raw transfer]



C8E_B_24(2Y2X)
?
[Raw transfer]



C8E_A_4(3T0S)
?
[Raw transfer]



C8E_B_9(4FMS)
?
[Raw transfer]



C8E_A_8(2QTK)
?
[Raw transfer]



C8E_A_7(3SZV)
?
[Raw transfer]



C8E_A_2(3SY7)
PORD_PSEAE
[Raw transfer]



C8E_A_9(2Y0K)
?
[Raw transfer]



C8E_A_7(2Y0H)
?
[Raw transfer]



C8E_A_10(3T24)
?
[Raw transfer]



C8E_A_6(3SY7)
PORD_PSEAE
[Raw transfer]
21 PsiBlast_CBE 95.12100% -31 - C5 -4FMS 1.9 ?
22 PsiBlast_CBE 94.54100% -28 - C5 -3SZD 2.4 ?
1 PsiBlast_PDB 94.01100% -28 - C5 -4FMS 1.8 ?
2 PsiBlast_PDB 93.77100% -27 - C5 -3SZD 1.8 ?
23 PsiBlast_CBE 85.6070% -19 - C5 -3JTY - ? -
3 PsiBlast_PDB 85.5270% -17 - C5 -3JTY - ? -
6 PsiBlast_PDB 78.9956% -16 - C5 -2Y2X 2.2 ?
4 PsiBlast_PDB 78.7956% -17 - C5 -3SYS 3.2 ?
24 PsiBlast_CBE 78.5856% -17 - C5 -3SYS 3.9 ?
25 PsiBlast_CBE 78.5256% -16 - C5 -2Y2X 4.0 ?
26 PsiBlast_CBE 78.2356% -18 - C5 -2QTK 3.1 ?
33 HHSearch 78.1755% -16 - C5 -2Y2X 2.2 ?
5 PsiBlast_PDB 78.1156% -20 - C5 -2QTK 2.5 ?
7 PsiBlast_PDB 77.3952% -15 - C5 -4FT6 2.3 ?
17 PsiBlast_PDB 76.9538% -22 - C5 -4FRX 3.0 ?
29 PsiBlast_CBE 76.7838% -20 - C5 -4FRX 2.5 ?
16 PsiBlast_PDB 74.9543% -21 - C5 -3SZV - ? -
8 PsiBlast_PDB 74.8944% -21 - C5 -2Y0L - ? -
12 PsiBlast_PDB 74.7744% -20 - C5 -3T0S 1.9 ?
11 PsiBlast_PDB 74.7744% -20 - C5 -2Y0H 1.9 ?
14 PsiBlast_PDB 72.6842% -22 - C5 -4FSP 1.7 ?
39 HHSearch 72.3342% -21 - C5 -2Y0H 3.9 ?
18 PsiBlast_PDB 72.0338% -22 - C5 -3SY7 2.1 PORD_PSEAE
15 PsiBlast_PDB 71.8343% -19 - C5 -2Y0K 2.5 ?
35 HHSearch 71.2142% -21 * C5 *3SZV 2.0 ?
36 HHSearch 68.7836% -15 - C5 -3SY7 2.3 PORD_PSEAE
40 HHSearch 68.7140% -13 - C5 -3T24 2.8 ?