@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0280: (2015-12-29 )
MSIEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDAGNIVFHGEDVSQHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPKGERPGESAIKAKVHELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRRWLARLHEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPASDFVYHFLGDSNRLQLGNDQHLLFRPHEVSLSRSAVAEHRAAEVRDIRPLGAITRVTLKVDGQDELIEAEVVKDHDSLAGLARGETLYFKPKAFQPVANL

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]
104 HHSearch 85.3043%-109 - C1 -1Z47 - ? -
103 HHSearch 85.0145%-108 - C1 -2IT1 - ? -
108 HHSearch 84.8938%-108 - C1 -3RLF - MALK_ECOLI -
105 HHSearch 83.6241%-108 - C1 -2YYZ - ? -
122 Fugue 81.2942%-104 - C1 -1Z47 - ? -
5 PsiBlast_PDB 78.6639%-106 - C1 -2YYZ - ? -
22 PsiBlast_CBE 78.1242%-124 - C1 -2IT1 - ? -
2 PsiBlast_PDB 78.0242%-117 - C1 -2IT1 - ? -
101 HHSearch 76.6540%-116 - C1 -1V43 - ? -
50 PsiBlast_CBE 74.7736%-102 - C1 -3FVQ 7.5 FBPC_NEIG1
51 PsiBlast_CBE 74.5836%-102 - C1 -3FVQ 6.9 FBPC_NEIG1
107 HHSearch 73.6137%-100 - C1 -3FVQ 6.9 FBPC_NEIG1
1 PsiBlast_PDB 73.5552%-130 - C1 -1Z47 - ? -
21 PsiBlast_CBE 71.8252%-129 - C1 -1Z47 - ? -
102 HHSearch 71.2638% -89 - C1 -3D31 - ? -
44 PsiBlast_CBE 70.5834%-112 - C1 -1OXV - ? -
46 PsiBlast_CBE 70.5434%-116 - C1 -1OXU - ? -
43 PsiBlast_CBE 70.4034%-115 - C1 -1OXV - ? -
28 PsiBlast_CBE 70.2944%-124 - C1 -3PUX - MALK_ECOLI -
30 PsiBlast_CBE 70.1544%-123 - C1 -3PUV - MALK_ECOLI -
56 PsiBlast_CBE 63.3341%-115 - C1 -3C4J 5.2 ?
54 PsiBlast_CBE 60.9841%-110 - C1 -3C41 5.9 ?
64 PsiBlast_CBE 60.3741%-109 - C1 -2OLK 5.8 ?
66 PsiBlast_CBE 60.3141%-108 - C1 -2OLK 5.9 ?
78 PsiBlast_CBE 59.2942%-121 - C1 -4U00 6.2 ?
65 PsiBlast_CBE 59.0741%-110 - C1 -2OLK 6.0 ?
55 PsiBlast_CBE 58.8141%-110 - C1 -3C41 6.7 ?
57 PsiBlast_CBE 58.7341%-110 - C1 -3C4J 6.6 ?
69 PsiBlast_CBE 58.5741%-111 - C1 -2OLJ 5.9 ?
67 PsiBlast_CBE 58.3341%-109 - C1 -2OLK 5.9 ?
72 PsiBlast_CBE 58.0237%-114 - C1 -4YMU 6.1 ?
59 PsiBlast_CBE 57.9741%-103 - C1 -2Q0H 5.5 ?
73 PsiBlast_CBE 57.7037%-117 - C1 -4YMU 5.9 ?
58 PsiBlast_CBE 57.5541%-107 - C1 -2Q0H 5.6 ?
113 HHSearch 56.9939%-113 * C1 *2OLJ 5.9 ?
71 PsiBlast_CBE 55.8837%-115 - C1 -4YMV 6.0 ?
68 PsiBlast_CBE 55.4741%-102 - C1 -2OLJ 5.7 ?
70 PsiBlast_CBE 54.5337%-115 - C1 -4YMV 5.3 ?