@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0291: (2015-12-29 )
MKSRKINKSRLALAITAGTLGALAQQAVAAGFIEDSKASLTLRNFYINTDNRNGTASPSKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRLDGGGRAGKSGLDRQPGTVFPLESNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKFYYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQIGPGVLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTARGDQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSGLPAAGSSNNQRDQDENRLIVSYTLPLL

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C8E_B_9(4FRX)
?
[Raw transfer]



C8E_A_5(4FRX)
?
[Raw transfer]



C8E_A_7(2ODJ)
PORD_PSEAE
[Raw transfer]



C8E_A_5(4FT6)
?
[Raw transfer]



C8E_A_6(4FSP)
?
[Raw transfer]



C8E_A_9(2Y0H)
?
[Raw transfer]



C8E_B_5(3SZD)
?
[Raw transfer]



C8E_A_7(3SZV)
?
[Raw transfer]



C8E_B_9(4FMS)
?
[Raw transfer]



C8E_A_6(2QTK)
?
[Raw transfer]



C8E_A_16(3SYS)
?
[Raw transfer]



C8E_A_16(2Y2X)
?
[Raw transfer]



C8E_B_5(3SZD)
?
[Raw transfer]



C8E_A_2(3SY7)
PORD_PSEAE
[Raw transfer]



C8E_B_23(2QTK)
?
[Raw transfer]



C8E_A_6(2Y2X)
?
[Raw transfer]



C8E_A_2(3SY7)
PORD_PSEAE
[Raw transfer]



C8E_B_9(4FMS)
?
[Raw transfer]
1 PsiBlast_PDB 98.94100% -32 - C5 -4FRX 2.8 ?
21 PsiBlast_CBE 97.99100% -28 - C5 -4FRX 2.5 ?
3 PsiBlast_PDB 79.1048% -28 - C5 -3T20 - ? -
23 PsiBlast_CBE 79.0044% -30 - C5 -3T24 - ? -
2 PsiBlast_PDB 78.8947% -28 - C5 -2Y0L - ? -
22 PsiBlast_CBE 77.6544% -29 - C5 -3T24 - ? -
7 PsiBlast_PDB 77.4940% -19 - C5 -4FT6 2.2 ?
4 PsiBlast_PDB 77.1044% -26 - C5 -3T24 - ? -
6 PsiBlast_PDB 76.4442% -31 - C5 -4FSP 2.1 ?
9 PsiBlast_PDB 76.2440% -37 - C5 -3T0S - ? -
8 PsiBlast_PDB 76.2440% -37 - C5 -2Y0H - ? -
35 HHSearch 76.0149% -24 - C5 -2Y0L - ? -
12 PsiBlast_PDB 75.6838% -22 - C5 -3JTY - ? -
36 HHSearch 75.6144% -31 - C5 -2Y0H 2.9 ?
24 PsiBlast_CBE 75.1338% -24 - C5 -3JTY - ? -
37 HHSearch 74.8345% -20 * C5 *3T24 - ? -
25 PsiBlast_CBE 74.3338% -28 - C5 -4FMS 1.9 ?
26 PsiBlast_CBE 74.1438% -27 - C5 -3SZD 2.4 ?
14 PsiBlast_PDB 74.1038% -25 - C5 -3SZD 2.3 ?
5 PsiBlast_PDB 74.0343% -27 - C5 -4FRT - ? -
13 PsiBlast_PDB 73.7138% -26 - C5 -4FMS 1.9 ?
34 HHSearch 72.5041% -32 - C5 -3SZV 1.8 ?
17 PsiBlast_PDB 71.7836% -22 - C5 -3SYS 3.7 ?
16 PsiBlast_PDB 71.6936% -22 - C5 -2Y2X 3.7 ?
18 PsiBlast_PDB 71.5731% -21 - C5 -3SY7 2.1 PORD_PSEAE
30 HHSearch 71.2837% -24 - C5 -2Y2X 2.2 ?
28 PsiBlast_CBE 71.1936% -21 - C5 -2QTK 3.3 ?
15 PsiBlast_PDB 71.1436% -19 - C5 -2QTK 2.2 ?
33 HHSearch 70.3732% -18 - C5 -3SY7 2.1 PORD_PSEAE
19 PsiBlast_PDB 69.3731% -22 - C5 -2ODJ 2.2 PORD_PSEAE