@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0316: (2015-12-30 )
MSKTSLDKSKIKFLLLEGVHQNAVDTLKAAGYTNIEYLKTALSGDELKERIADAHFIGIRSRTQLTEEVFDCAKKLIAVGCFCIGTNQVDLNAARERGIAVFNAPYSNTRSVAELVLAEAILLLRGIPEKNASCHRGGWIKSAANSFEIRGKKLGIVGYGSIGTQLSVLAEALGMQVFFYDTVTKLPLGNAVQIGSLHELLGMSDIVSLHVPELPSTQWMIGEKEIRAMKKGGILINAARGTVVELDHLAAAIKDEHLIGAAIDVFPVEPKSNDEEFASPLRGLDRVILTPHIGGSTAEAQANIGLEVAEKLVKYSDNGTSVSSVNFPEVALPSHPGKHRLLHIHANIPGVMSEINKVFADNGINVSGQYLQTNEKVGYVVIDVDAEYSDLALEKLQQVNGTIRSRVLF

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_E_5(2P9G)
SERA_ECOLI
[Raw transfer]



NAD_A_5(1PSD)
SERA_ECOLI
[Raw transfer]



NAD_B_9(1PSD)
SERA_ECOLI
[Raw transfer]



NAI_F_6(2P9G)
SERA_ECOLI
[Raw transfer]



NAI_E_5(2P9C)
SERA_ECOLI
[Raw transfer]



NAI_G_7(2P9C)
SERA_ECOLI
[Raw transfer]



NAI_A_3(2PA3)
SERA_ECOLI
[Raw transfer]



NAD_A_5(2G76)
SERA_HUMAN
[Raw transfer]



NAD_D_4(1WWK)
?
[Raw transfer]



NAD_C_3(1WWK)
?
[Raw transfer]



NAD_C_3(1WWK)
?
[Raw transfer]



GOL_A_3(3K5P)
?
[Raw transfer]



GOL_A_3(3K5P)
?
[Raw transfer]
26 PsiBlast_CBE 90.6963%-114 - C1 -2P9G 9.8 SERA_ECOLI
6 PsiBlast_PDB 90.6363%-115 - C1 -1YBA - SERA_ECOLI -
21 PsiBlast_CBE 90.6163%-115 - C1 -1PSD 9.5 SERA_ECOLI
25 PsiBlast_CBE 90.5063%-114 - C1 -2P9C 9.7 SERA_ECOLI
93 HHSearch 90.3664%-117 - C1 -1SC6 - SERA_ECOLI -
5 PsiBlast_PDB 90.2163%-116 - C1 -2P9G 9.6 SERA_ECOLI
2 PsiBlast_PDB 90.1163%-114 - C1 -2P9C 9.2 SERA_ECOLI
22 PsiBlast_CBE 89.9163%-115 - C1 -2P9E - SERA_ECOLI -
3 PsiBlast_PDB 89.6663%-113 - C1 -2P9E - SERA_ECOLI -
7 PsiBlast_PDB 89.4362%-115 - C1 -1SC6 - SERA_ECOLI -
1 PsiBlast_PDB 89.3363%-111 * C1 *1PSD 10.0 SERA_ECOLI
24 PsiBlast_CBE 89.3263%-114 - C1 -2P9E - SERA_ECOLI -
23 PsiBlast_CBE 89.3263%-114 - C1 -2P9E - SERA_ECOLI -
4 PsiBlast_PDB 89.2963%-113 - C1 -2PA3 9.5 SERA_ECOLI
94 HHSearch 86.2856%-116 - C1 -3K5P 2.5 ?
8 PsiBlast_PDB 85.6955%-115 - C1 -3K5P 2.5 ?
95 HHSearch 71.9130%-111 - C1 -1YGY - SERA_MYCTU -
113 Fugue 68.7229%-105 - C1 -1YGY - SERA_MYCTU -
27 PsiBlast_CBE 68.1939%-117 - C1 -1WWK 9.4 ?
106 HHSearch 67.0539%-112 - C1 -1WWK 9.1 ?
9 PsiBlast_PDB 66.9739%-114 - C1 -1WWK 9.1 ?
99 HHSearch 63.8132%-110 - C1 -2G76 8.7 SERA_HUMAN