@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0330: (2015-12-31 )
MNQDQLKQAVAQAAVDHILPHLDSKSIVGVGTGSTANFFIDALARHKAEFDGAVASSEATAKRLKEHGIPVYELNTVSELEFYVDGADESNERLELIKGGGAALTREKIVAAVAKTFICIADASKLVPILGQFPLPVEVIPMARSHVARQLVKLGGDPVYREGVLTDNGNIILDVHNLRIDSPVELEEKINAIVGVVTNGLFAARPADLLLLGTADGVKTLKA

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGO_D_20(3IXQ)
RPIA_METJA
[Raw transfer]




FLC_A_5(4X84)
RPIA_PSEAE
[Raw transfer]




FLC_B_6(4X84)
RPIA_PSEAE
[Raw transfer]




5RP_B_4(3ENW)
RPIA_VIBVY
[Raw transfer]




FLC_D_8(4X84)
RPIA_PSEAE
[Raw transfer]




5RP_A_5(4M8L)
RPIA_FRATW
[Raw transfer]




FLC_C_7(4X84)
RPIA_PSEAE
[Raw transfer]




DER_C_19(1LK7)
RPIA_PYRHO
[Raw transfer]




5RP_B_22(4M8L)
RPIA_FRATW
[Raw transfer]




DER_A_17(1LK7)
RPIA_PYRHO
[Raw transfer]




CIT_C_3(1M0S)
RPIA_HAEIN
[Raw transfer]




CIT_D_4(1M0S)
RPIA_HAEIN
[Raw transfer]




CIT_C_3(1M0S)
RPIA_HAEIN
[Raw transfer]




A5P_A_4(1UJ6)
RPIA_THET2
[Raw transfer]




DER_D_20(1LK7)
RPIA_PYRHO
[Raw transfer]




A5P_A_4(1UJ6)
RPIA_THET2
[Raw transfer]




DER_B_18(1LK7)
RPIA_PYRHO
[Raw transfer]




5RP_A_2(1UJ5)
RPIA_THET2
[Raw transfer]




5RP_A_3(3HHE)
RPIA_BARHE
[Raw transfer]




5RP_A_3(3ENW)
RPIA_VIBVY
[Raw transfer]




ABF_A_3(1O8B)
RPIA_ECOLI
[Raw transfer]




5RP_B_6(3HHE)
RPIA_BARHE
[Raw transfer]




ABF_A_3(1O8B)
RPIA_ECOLI
[Raw transfer]




3GR_D_13(3KWM)
RPIA_FRATT
[Raw transfer]




EDO_A_3(3U7J)
?
[Raw transfer]




ABF_A_3(3ENV)
RPIA_VIBVY
[Raw transfer]




PGO_B_10(3IXQ)
RPIA_METJA
[Raw transfer]




PGO_D_19(3IXQ)
RPIA_METJA
[Raw transfer]




PGO_A_8(3IXQ)
RPIA_METJA
[Raw transfer]




PGO_A_8(3IXQ)
RPIA_METJA
[Raw transfer]




PGO_C_15(3IXQ)
RPIA_METJA
[Raw transfer]




PGO_B_12(3IXQ)
RPIA_METJA
[Raw transfer]




ABF_B_4(3ENV)
RPIA_VIBVY
[Raw transfer]




PEG_C_9(3KWM)
RPIA_FRATT
[Raw transfer]




22 PsiBlast_CBE 99.55100%-108 - C6 -4X84 3.5 RPIA_PSEAE
23 PsiBlast_CBE 98.57100%-106 - C6 -4X84 3.5 RPIA_PSEAE
21 PsiBlast_CBE 98.41100%-106 - C6 -4X84 3.5 RPIA_PSEAE
1 PsiBlast_PDB 98.11100%-105 - C6 -4X84 3.5 RPIA_PSEAE
8 PsiBlast_PDB 85.2659%-101 - C6 -3U7J 2.8 ?
26 PsiBlast_CBE 83.7658%-102 - C6 -1M0S 3.1 RPIA_HAEIN
9 PsiBlast_PDB 82.6758%-102 - C6 -1M0S 3.2 RPIA_HAEIN
25 PsiBlast_CBE 82.6361%-100 - C6 -3ENV 2.8 RPIA_VIBVY
3 PsiBlast_PDB 82.6261%-102 - C6 -3ENQ - RPIA_VIBVY -
58 HHSearch 82.5359%-104 - C6 -1M0S 3.2 RPIA_HAEIN
24 PsiBlast_CBE 82.3661% -99 - C6 -3ENW 3.1 RPIA_VIBVY
5 PsiBlast_PDB 80.9361%-101 - C6 -3ENW 3.7 RPIA_VIBVY
4 PsiBlast_PDB 79.4761% -97 - C6 -3ENV 3.0 RPIA_VIBVY
30 PsiBlast_CBE 77.4255%-100 - C6 -4IO1 - RPIA_FRATT -
32 PsiBlast_CBE 77.1055% -93 - C6 -3KWM 2.8 RPIA_FRATT
11 PsiBlast_PDB 77.0355% -96 - C6 -4IO1 - RPIA_FRATT -
33 PsiBlast_CBE 76.5755% -96 - C6 -3KWM - RPIA_FRATT -
12 PsiBlast_PDB 75.9355% -96 - C6 -4M8L 3.6 RPIA_FRATW
31 PsiBlast_CBE 75.9055% -97 - C6 -3KWM 2.4 RPIA_FRATT
29 PsiBlast_CBE 75.8055% -96 - C6 -4M8L 4.0 RPIA_FRATW
41 PsiBlast_CBE 74.3143%-102 - C6 -3IXQ 3.1 RPIA_METJA
16 PsiBlast_PDB 74.2843% -99 - C6 -3IXQ 2.0 RPIA_METJA
43 PsiBlast_CBE 74.0643%-101 - C6 -3IXQ 3.5 RPIA_METJA
42 PsiBlast_CBE 73.2143% -99 - C6 -3IXQ 2.7 RPIA_METJA
34 PsiBlast_CBE 72.3439% -80 - C6 -1LK7 4.1 RPIA_PYRHO
14 PsiBlast_PDB 71.9339% -82 - C6 -1LK7 4.1 RPIA_PYRHO
67 HHSearch 71.5745% -81 - C6 -3IXQ 2.0 RPIA_METJA
35 PsiBlast_CBE 71.4639% -76 - C6 -1LK7 4.0 RPIA_PYRHO
63 HHSearch 71.3540% -82 - C6 -1UJ6 4.0 RPIA_THET2
36 PsiBlast_CBE 71.1839% -78 - C6 -1LK7 4.1 RPIA_PYRHO
59 HHSearch 71.1065% -91 - C6 -1O8B 4.4 RPIA_ECOLI
7 PsiBlast_PDB 70.2663% -92 - C6 -1O8B 4.4 RPIA_ECOLI
18 PsiBlast_PDB 69.5440% -88 - C6 -1UJ6 4.0 RPIA_THET2
19 PsiBlast_PDB 68.9640% -86 - C6 -1UJ5 3.7 RPIA_THET2
66 HHSearch 66.9036% -82 - C6 -3HHE 4.3 RPIA_BARHE
44 PsiBlast_CBE 64.7336% -84 - C6 -3HHE 3.6 RPIA_BARHE