@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0420: (2016-01-04 )
MGLNADWMQRDLNVLWHPCTQMKDHERLPVIPIRRGEGVWLEDFEGKRYIDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHQPVIELSERLVKITPPGLDRVFYADSGSAGIEVALKMSYHFWLNSGRPRKKRFVTLTNSYHGETIAAMSVGDVALFTETYKSLLLDTIKVPSPDCFLRPDGMCWEEHSRNMFAHMERTLAEGHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIAPDFLCLSKALTGGYLPMSAVLTSETIYRGFYDDYQTLRAFLHSHTYTGNPLACAAALATLDIFEEDKVIEANRALSTHMARATAHLADHPHVAEVRQTGMVLAIEMVQDKASRTPYPWQERRGLKVFQHGLERGALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIATRDAVSVAVSDFHPDHRDPG

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2B6_B_8(4MQQ)
BIOA_MYCTU
[Raw transfer]




2B9_A_3(4MQR)
BIOA_MYCTU
[Raw transfer]




2B9_B_6(4MQR)
BIOA_MYCTU
[Raw transfer]




2B1_B_6(4MQP)
BIOA_MYCTU
[Raw transfer]




2B6_A_7(4MQQ)
BIOA_MYCTU
[Raw transfer]




2B1_A_3(4MQP)
BIOA_MYCTU
[Raw transfer]




PL8_A_3(3TFU)
BIOA_MYCTU
[Raw transfer]




PL8_B_4(3TFU)
BIOA_MYCTU
[Raw transfer]




PLP_A_5(1S07)
BIOA_ECOLI
[Raw transfer]




PLP_B_6(1S07)
BIOA_ECOLI
[Raw transfer]




3VW_A_4(4WYE)
?
[Raw transfer]




3VW_B_7(4WYE)
?
[Raw transfer]




PLP_A_3(4XEW)
?
[Raw transfer]




PLP_B_8(1MLZ)
BIOA_ECOLI
[Raw transfer]




KAP_A_4(4CXQ)
BIOA_MYCTU
[Raw transfer]




PLP_A_4(4WYF)
?
[Raw transfer]




PLP_B_8(1MLY)
BIOA_ECOLI
[Raw transfer]




PLP_A_3(4W1W)
BIOA_MYCTU
[Raw transfer]




KAP_B_7(1QJ3)
BIOA_ECOLI
[Raw transfer]




PLP_B_10(4W1W)
BIOA_MYCTU
[Raw transfer]




PLP_B_5(4XEW)
?
[Raw transfer]




3VR_A_4(4WYD)
?
[Raw transfer]




PLP_B_10(4W1X)
BIOA_MYCTU
[Raw transfer]




PLP_B_5(4WYF)
?
[Raw transfer]




PLP_A_3(4W1X)
BIOA_MYCTU
[Raw transfer]




PLP_A_5(1MGV)
BIOA_ECOLI
[Raw transfer]




PLP_A_3(4WYC)
?
[Raw transfer]




PLP_B_8(1DTY)
BIOA_ECOLI
[Raw transfer]




PLP_A_3(3TFT)
BIOA_MYCTU
[Raw transfer]




PLP_B_6(1QJ3)
BIOA_ECOLI
[Raw transfer]




PLP_B_8(4WYC)
?
[Raw transfer]




PLP_A_3(4CXQ)
BIOA_MYCTU
[Raw transfer]




PLP_B_5(3TFT)
BIOA_MYCTU
[Raw transfer]




PLP_B_6(1MGV)
BIOA_ECOLI
[Raw transfer]




PLP_B_8(4CXQ)
BIOA_MYCTU
[Raw transfer]




2BG_A_4(4CXR)
BIOA_MYCTU
[Raw transfer]




PLP_B_13(4WYD)
?
[Raw transfer]




PLP_B_8(4WYE)
?
[Raw transfer]




PLP_A_3(4WYE)
?
[Raw transfer]




ACZ_B_4(1MLY)
BIOA_ECOLI
[Raw transfer]




PLP_A_7(1DTY)
BIOA_ECOLI
[Raw transfer]




PLP_A_3(4WYD)
?
[Raw transfer]




PLP_A_3(4CXR)
BIOA_MYCTU
[Raw transfer]




PLP_B_6(1QJ5)
BIOA_ECOLI
[Raw transfer]




PLP_A_7(1DTY)
BIOA_ECOLI
[Raw transfer]




PLP_B_7(4CXR)
BIOA_MYCTU
[Raw transfer]




PLP_A_3(4WYG)
?
[Raw transfer]




PLP_B_10(4WYG)
?
[Raw transfer]




3W1_A_5(4WYG)
?
[Raw transfer]




IPA_A_7(1MGV)
BIOA_ECOLI
[Raw transfer]




IPA_B_7(1S07)
BIOA_ECOLI
[Raw transfer]




3GS_A_4(4W1V)
BIOA_MYCTU
[Raw transfer]




3GS_B_7(4W1V)
BIOA_MYCTU
[Raw transfer]




1 PsiBlast_PDB 94.2140%-116 - C1 -3DOD - BIOK_BACSU -
32 PsiBlast_CBE 93.9740%-114 - C1 -1S06 - BIOA_ECOLI -
23 PsiBlast_CBE 93.7941%-114 - C1 -1QJ5 3.9 BIOA_ECOLI
21 PsiBlast_CBE 93.5640%-115 - C1 -3DOD - BIOK_BACSU -
25 PsiBlast_CBE 93.4741%-113 - C1 -1MLZ 3.4 BIOA_ECOLI
30 PsiBlast_CBE 93.4241%-115 - C1 -1S08 - BIOA_ECOLI -
27 PsiBlast_CBE 93.2741%-112 - C1 -1S07 4.1 BIOA_ECOLI
26 PsiBlast_CBE 93.2141%-113 - C1 -1MLY 4.4 BIOA_ECOLI
2 PsiBlast_PDB 93.0040%-115 - C1 -3DRD - BIOK_BACSU -
28 PsiBlast_CBE 92.4341%-109 - C1 -1MGV 3.4 BIOA_ECOLI
31 PsiBlast_CBE 92.2840%-110 - C1 -1S09 - BIOA_ECOLI -
4 PsiBlast_PDB 91.9141%-110 - C1 -1MGV 2.4 BIOA_ECOLI
5 PsiBlast_PDB 91.8841%-111 - C1 -1S07 3.5 BIOA_ECOLI
29 PsiBlast_CBE 91.6941%-112 - C1 -1S0A - BIOA_ECOLI -
24 PsiBlast_CBE 91.5241%-113 - C1 -1QJ3 3.5 BIOA_ECOLI
74 HHSearch 90.5939%-113 - C1 -3DOD - BIOK_BACSU -
22 PsiBlast_CBE 90.1340%-110 - C1 -1DTY 3.4 BIOA_ECOLI
3 PsiBlast_PDB 89.5540%-109 - C1 -1DTY 3.3 BIOA_ECOLI
62 Fugue 85.7839%-108 - C1 -1DTY 3.3 BIOA_ECOLI
7 PsiBlast_PDB 81.3535%-108 - C1 -3TFT 3.1 BIOA_MYCTU
33 PsiBlast_CBE 80.3635%-109 - C1 -4W1W 3.5 BIOA_MYCTU
12 PsiBlast_PDB 80.0535%-107 - C1 -4CXQ 4.1 BIOA_MYCTU
44 PsiBlast_CBE 79.8635%-109 - C1 -4W1X 3.4 BIOA_MYCTU
39 PsiBlast_CBE 79.8535%-107 - C1 -4WYD 3.7 ?
14 PsiBlast_PDB 79.8535%-108 - C1 -4W1X 3.4 BIOA_MYCTU
10 PsiBlast_PDB 79.8135%-107 - C1 -4MQQ 6.9 BIOA_MYCTU
35 PsiBlast_CBE 79.7635%-107 - C1 -4WYG 3.3 ?
36 PsiBlast_CBE 79.7435%-107 - C1 -4WYF 3.3 ?
47 PsiBlast_CBE 79.7235%-105 - C1 -4MQP 6.1 BIOA_MYCTU
13 PsiBlast_PDB 79.6835%-107 - C1 -4CXR 3.3 BIOA_MYCTU
16 PsiBlast_PDB 79.6535%-107 - C1 -4WYE 4.4 ?
19 PsiBlast_PDB 79.5435%-106 - C1 -4XEW 3.5 ?
8 PsiBlast_PDB 79.5135%-105 - C1 -3TFU 5.6 BIOA_MYCTU
48 PsiBlast_CBE 79.3935%-105 - C1 -4CXR 3.5 BIOA_MYCTU
53 PsiBlast_CBE 79.3535%-107 - C1 -4W1V 4.7 BIOA_MYCTU
50 PsiBlast_CBE 79.1335%-107 - C1 -3TFU 6.0 BIOA_MYCTU
6 PsiBlast_PDB 78.6735%-108 - C1 -4W1W 3.2 BIOA_MYCTU
49 PsiBlast_CBE 78.6435%-105 - C1 -4CXQ 3.6 BIOA_MYCTU
15 PsiBlast_PDB 78.4735%-107 - C1 -4WYC 2.6 ?
37 PsiBlast_CBE 78.3935%-105 - C1 -4WYE 3.9 ?
45 PsiBlast_CBE 78.2735%-106 - C1 -4MQR 5.8 BIOA_MYCTU
9 PsiBlast_PDB 78.2335%-106 - C1 -4MQP 6.7 BIOA_MYCTU
52 PsiBlast_CBE 78.1935%-106 - C1 -4W1V 4.5 BIOA_MYCTU
51 PsiBlast_CBE 78.1235%-106 - C1 -3TFT 3.5 BIOA_MYCTU
18 PsiBlast_PDB 78.0935%-106 - C1 -4WYG 4.3 ?
34 PsiBlast_CBE 78.0635%-105 - C1 -4XEW 3.4 ?
38 PsiBlast_CBE 77.9535%-105 - C1 -4WYD 3.3 ?
17 PsiBlast_PDB 77.8335%-106 - C1 -4WYF 3.2 ?
40 PsiBlast_CBE 77.8235%-108 - C1 -4WYC 3.0 ?
46 PsiBlast_CBE 77.7935%-105 - C1 -4MQQ 7.2 BIOA_MYCTU
11 PsiBlast_PDB 77.4835%-108 - C1 -4MQR 6.2 BIOA_MYCTU