@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0432: (2016-01-04 )
MSAVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRKYAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMVLDDGGDLTEILHKKYPQMLERIHGITEETTTGVHRLLDMLKNGTLKVPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKQALVIGYGDVGKGSSQSLRQEGMIVKVAEVDPICAMQACMDGFEVVSPYKNGINDGTEASIDAALLGKIDLIVTTTGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIHRTGKDGFDAHNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADN_B_10(3OND)
SAHH_LUPLU
[Raw transfer]



ADN_A_5(3OND)
SAHH_LUPLU
[Raw transfer]



3AD_B_8(3ONF)
SAHH_LUPLU
[Raw transfer]



3AD_A_4(3ONF)
SAHH_LUPLU
[Raw transfer]



ADC_A_5(1A7A)
SAHH_HUMAN
[Raw transfer]



ADE_B_10(3ONE)
SAHH_LUPLU
[Raw transfer]



ADE_A_5(3ONE)
SAHH_LUPLU
[Raw transfer]



NAD_B_7(3OND)
SAHH_LUPLU
[Raw transfer]



NAD_B_7(3ONE)
SAHH_LUPLU
[Raw transfer]



NAD_B_6(3ONF)
SAHH_LUPLU
[Raw transfer]



NAD_A_3(3OND)
SAHH_LUPLU
[Raw transfer]



NAD_A_3(3ONF)
SAHH_LUPLU
[Raw transfer]



NAD_B_5(3GLQ)
SAHH_BURP1
[Raw transfer]



NAD_A_3(3ONE)
SAHH_LUPLU
[Raw transfer]



NAD_A_3(3GLQ)
SAHH_BURP1
[Raw transfer]



NAD_E_5(1LI4)
SAHH_HUMAN
[Raw transfer]



NAD_A_3(1A7A)
SAHH_HUMAN
[Raw transfer]



NAD_A_3(3OND)
SAHH_LUPLU
[Raw transfer]



NAI_A_3(3X2F)
SAHH_THEMA
[Raw transfer]



NAD_B_4(3D64)
SAHH_BURP1
[Raw transfer]



NAD_A_3(3D64)
SAHH_BURP1
[Raw transfer]



NAD_A_3(3D64)
SAHH_BURP1
[Raw transfer]



NAD_A_3(3MTG)
SAHH2_HUMAN
[Raw transfer]



NAD_B_4(3MTG)
SAHH2_HUMAN
[Raw transfer]
10 PsiBlast_PDB 93.5857% -87 - C3 -1KY5 - SAHH_RAT -
50 PsiBlast_CBE 93.2957% -86 - C3 -1KY5 - SAHH_RAT -
52 PsiBlast_CBE 93.2757% -86 - C3 -1KY5 - SAHH_RAT -
111 HHSearch 93.2358% -84 - C3 -3D64 9.4 SAHH_BURP1
41 PsiBlast_CBE 93.2057% -88 - C3 -1B3R - SAHH_RAT -
49 PsiBlast_CBE 92.8156% -80 - C3 -3NJ4 - SAHH_HUMAN -
67 PsiBlast_CBE 92.7648% -77 - C3 -3DHY - SAHH_MYCTU -
37 PsiBlast_CBE 92.7257% -81 - C3 -1K0U - SAHH_RAT -
116 HHSearch 92.6749% -92 - C3 -3GVP - SAHH3_HUMAN -
59 PsiBlast_CBE 92.6756% -83 - C3 -4PGF - SAHH_HUMAN -
8 PsiBlast_PDB 92.6556% -78 - C3 -3NJ4 - SAHH_HUMAN -
51 PsiBlast_CBE 92.6257% -85 - C3 -1KY5 - SAHH_RAT -
60 PsiBlast_CBE 92.6056% -85 - C3 -4PFJ - SAHH_HUMAN -
32 PsiBlast_CBE 92.5957% -90 - C3 -1KY4 - SAHH_RAT -
9 PsiBlast_PDB 92.5957% -85 - C3 -1D4F - SAHH_RAT -
33 PsiBlast_CBE 92.3757% -90 - C3 -1KY4 - SAHH_RAT -
2 PsiBlast_PDB 92.3657% -88 - C3 -1B3R - SAHH_RAT -
15 PsiBlast_PDB 92.3151% -78 - C3 -4LVC - ? -
71 PsiBlast_CBE 92.1148% -76 - C3 -3CE6 - SAHH_MYCTU -
113 HHSearch 92.0853% -78 - C3 -3OND 12.0 SAHH_LUPLU
7 PsiBlast_PDB 91.6356% -82 - C3 -1LI4 9.5 SAHH_HUMAN
62 PsiBlast_CBE 90.9051% -80 - C3 -3D64 9.5 SAHH_BURP1
12 PsiBlast_PDB 90.6151% -79 - C3 -3D64 9.4 SAHH_BURP1
14 PsiBlast_PDB 90.3655% -81 - C3 -1A7A 9.8 SAHH_HUMAN
89 PsiBlast_CBE 90.2647% -72 - C3 -3ONF 11.8 SAHH_LUPLU
61 PsiBlast_CBE 90.1951% -74 - C3 -3GLQ 12.2 SAHH_BURP1
92 PsiBlast_CBE 90.1347% -70 - C3 -3ONE 12.4 SAHH_LUPLU
91 PsiBlast_CBE 89.9647% -70 - C3 -3ONE 12.5 SAHH_LUPLU
90 PsiBlast_CBE 89.5447% -72 - C3 -3ONF 11.7 SAHH_LUPLU
93 PsiBlast_CBE 89.3347% -72 - C3 -3OND 11.9 SAHH_LUPLU
94 PsiBlast_CBE 89.2447% -72 - C3 -3OND 12.0 SAHH_LUPLU
96 PsiBlast_CBE 89.1647% -90 - C3 -3MTG 8.0 SAHH2_HUMAN
13 PsiBlast_PDB 88.9851% -74 - C3 -3GLQ 12.2 SAHH_BURP1
95 PsiBlast_CBE 88.6247% -91 - C3 -3MTG 8.5 SAHH2_HUMAN
117 HHSearch 81.2137% -84 - C3 -3X2F 10.0 SAHH_THEMA