@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0480: (2016-01-06 )
MGNLSFLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTLPAVHLSNVEFPQAFEGAVLSFLGAA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_4(3OM8)
?
[Raw transfer]



MES_A_3(3OM8)
?
[Raw transfer]
101 HHSearch 97.94100%-120 - C1 -3OM8 3.1 ?
1 PsiBlast_PDB 97.4898%-120 - C1 -3OM8 2.2 ?
102 HHSearch 79.1542%-109 - C1 -2XUA - ? -
2 PsiBlast_PDB 78.2041%-107 * C1 *2XUA - ? -
105 HHSearch 66.3123%-110 - C1 -3W04 - D14_ORYSJ -
5 PsiBlast_PDB 65.7128% -93 - C1 -4UHC - ? -
4 PsiBlast_PDB 65.1428% -94 - C1 -4UHH - ? -
8 PsiBlast_PDB 64.3428% -92 - C1 -4UHF - ? -
6 PsiBlast_PDB 64.2328% -91 - C1 -4UHD - ? -
7 PsiBlast_PDB 63.7928% -91 - C1 -4UHE - ? -
3 PsiBlast_PDB 63.3724%-102 - C1 -4Q3L - ? -
10 PsiBlast_PDB 62.1425% -89 - C1 -3HEA - ESTE_PSEFL -
12 PsiBlast_PDB 61.9525% -90 - C1 -3T4U - ESTE_PSEFL -
15 PsiBlast_PDB 61.7523%-102 - C1 -2OCK - BPHL_HUMAN -
9 PsiBlast_PDB 61.4525% -90 - C1 -3HI4 - ESTE_PSEFL -
14 PsiBlast_PDB 61.3825% -90 - C1 -3IA2 - ESTE_PSEFL -
13 PsiBlast_PDB 61.3425% -90 - C1 -3T52 - ESTE_PSEFL -
11 PsiBlast_PDB 61.2525% -92 - C1 -1VA4 - ESTE_PSEFL -
16 PsiBlast_PDB 61.1923%-101 - C1 -2OCG - BPHL_HUMAN -
17 PsiBlast_PDB 61.0423%-101 - C1 -2OCI - BPHL_HUMAN -