@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0494: (2016-01-07 )
MHKRLNKLLVANRGEIAVRIIRAAQALGIPTVAVCSEADRDSLAARLADEVRLIGPARADRSYLDIEAILMAARETGADSIHPGYGFLSENPAFAEAVQAAGLVFVGPEAQTIRRMGDKAEARRTAMAAGVPVVPGSPGELGDLDAALACAEEVGYPLLVKASAGGGGRGIRIAHDADELRREFPIAQREAQAAFGSPAVYLERFIRQARHIEVQILGDGERAVHLFERECSLQRRRQKVFEEAPSAALDGAQRQALCESAVRLAQSLGYRGAGTLEYLFDAHSGEFFFIEMNTRIQVEHPVSEMVTGIDLVQAMLRIAAGEALPWRQEDIRLNGAALEMRINAEDPARNFFPSPGTVERLEWPQGEGVRVDSHLYPGYRVPPYYDSLLAKLIVHGRDRDEAFARARQALERTVLAGMATTLPLHRWLLADARVQAAQFDTATLETWLAERTAAAQEV

Atome Classification :

(42 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]




ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]




L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]




LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]




OA5_B_5(2W6Q)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




OA5_A_3(2W6Q)
ACCC_ECOLI
[Raw transfer]




LZJ_A_3(2V58)
ACCC_ECOLI
[Raw transfer]




OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]




L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]




L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]




L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]




OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RUP)
ACCC_ECOLI
[Raw transfer]




OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




32 PsiBlast_CBE 89.0151% -93 - C1 -2W71 6.4 ACCC_ECOLI
15 PsiBlast_PDB 88.1451% -92 - C1 -2V5A 4.7 ACCC_ECOLI
12 PsiBlast_PDB 88.1151% -95 - C1 -2VR1 4.9 ACCC_ECOLI
24 PsiBlast_CBE 87.8351% -90 - C1 -3JZF 8.6 ACCC_ECOLI
18 PsiBlast_PDB 87.7451% -96 - C1 -2W6O 3.9 ACCC_ECOLI
19 PsiBlast_PDB 87.6651% -92 - C1 -2W6P 5.6 ACCC_ECOLI
33 PsiBlast_CBE 87.6351% -92 - C1 -2W71 6.5 ACCC_ECOLI
38 PsiBlast_CBE 87.6151% -94 - C1 -2W6Q 4.1 ACCC_ECOLI
1 PsiBlast_PDB 87.5555% -89 - C1 -2VQD 7.2 ACCC_PSEAE
14 PsiBlast_PDB 87.5051% -91 - C1 -2V59 4.1 ACCC_ECOLI
26 PsiBlast_CBE 87.4051% -94 - C1 -3RV3 6.3 ACCC_ECOLI
20 PsiBlast_PDB 87.4051% -91 - C1 -2W6Q 4.1 ACCC_ECOLI
17 PsiBlast_PDB 87.3451% -92 - C1 -2W6N 3.9 ACCC_ECOLI
23 PsiBlast_CBE 87.3051% -90 - C1 -3JZI 7.7 ACCC_ECOLI
41 PsiBlast_CBE 87.2951% -94 - C1 -2W6M - ACCC_ECOLI -
51 PsiBlast_CBE 87.2851% -92 - C1 -3G8D 5.0 ACCC_ECOLI
8 PsiBlast_PDB 87.2251% -93 - C1 -3RV3 7.7 ACCC_ECOLI
39 PsiBlast_CBE 87.2151% -95 - C1 -2W6O 3.2 ACCC_ECOLI
45 PsiBlast_CBE 87.1851% -94 - C1 -2V58 5.9 ACCC_ECOLI
7 PsiBlast_PDB 87.1551% -90 - C1 -3RUP 7.9 ACCC_ECOLI
3 PsiBlast_PDB 87.0751% -88 - C1 -2VPQ 6.8 ?
27 PsiBlast_CBE 86.9951% -91 - C1 -3RUP 6.8 ACCC_ECOLI
25 PsiBlast_CBE 86.9951% -93 - C1 -3G8C 5.8 ACCC_ECOLI
35 PsiBlast_CBE 86.7151% -92 - C1 -2W70 3.8 ACCC_ECOLI
13 PsiBlast_PDB 86.6851% -90 - C1 -2V58 5.4 ACCC_ECOLI
50 PsiBlast_CBE 86.6651% -92 * C1 *3RV4 7.7 ACCC_ECOLI
34 PsiBlast_CBE 86.6651% -94 - C1 -2W70 3.7 ACCC_ECOLI
11 PsiBlast_PDB 86.3051% -94 - C1 -2J9G 5.4 ACCC_ECOLI
40 PsiBlast_CBE 86.2751% -92 - C1 -2W6N 5.6 ACCC_ECOLI
6 PsiBlast_PDB 86.1251% -92 - C1 -3G8C 5.5 ACCC_ECOLI
22 PsiBlast_CBE 86.0551% -87 - C1 -2VPQ 6.3 ?
44 PsiBlast_CBE 85.3451% -94 - C1 -2V59 4.0 ACCC_ECOLI
5 PsiBlast_PDB 84.8651% -91 - C1 -3JZI 7.6 ACCC_ECOLI
48 PsiBlast_CBE 84.8051% -92 - C1 -1DV2 3.7 ACCC_ECOLI
113 HHSearch 84.7550% -87 - C1 -2VPQ 6.8 ?
47 PsiBlast_CBE 84.6851% -89 - C1 -1DV2 4.6 ACCC_ECOLI
46 PsiBlast_CBE 84.3051% -94 - C1 -2J9G 7.2 ACCC_ECOLI
110 HHSearch 84.0744% -86 - C1 -3OUZ 7.1 ?
49 PsiBlast_CBE 83.4651% -94 - C1 -4RZQ 4.2 ACCC_HAEIN
97 PsiBlast_CBE 71.7942% -90 - C1 -3VA7 2.1 ?
119 HHSearch 69.2542% -88 - C1 -3VA7 2.1 ?
103 Fugue 67.7039% -84 - C1 -3VA7 2.1 ?