@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0523: (2016-01-08 )
MSETFTKGMARNIYFGGSVFFILLFLALTYHTEKTLPERTNEAAMSAAVVRGKLVWEQNNCVGCHTLLGEGAYFAPELGNVVGRRGGEEGFNTFLQAWMNIQPLNVPGRRAMPQFHLSEGQVDDLAEFLKWSSKIDTNQWPPNKEG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEC_C_10(3O0R)
NORC_PSEAE
[Raw transfer]



HEC_C_12(3WFD)
NORC_PSEAE
[Raw transfer]



HEC_C_12(3WFD)
NORC_PSEAE
[Raw transfer]



HEC_C_13(3WFC)
NORC_PSEAE
[Raw transfer]



HEC_C_13(3WFE)
NORC_PSEAE
[Raw transfer]



HEC_C_10(3O0R)
NORC_PSEAE
[Raw transfer]



HEC_C_10(3WFB)
NORC_PSEAE
[Raw transfer]
4 PsiBlast_PDB 96.7299%-100 - C4 -3WFD 10.9 NORC_PSEAE
5 PsiBlast_PDB 96.4599% -96 - C4 -3WFE 10.3 NORC_PSEAE
46 Fugue 96.1799% -98 - C4 -3O0R 10.5 NORC_PSEAE
1 PsiBlast_PDB 95.9899% -98 - C4 -3O0R 10.5 NORC_PSEAE
3 PsiBlast_PDB 95.6799% -95 - C4 -3WFC 11.1 NORC_PSEAE
22 HHSearch 95.5798%-100 - C4 -3WFD 10.9 NORC_PSEAE
2 PsiBlast_PDB 95.0699% -97 - C4 -3WFB 10.8 NORC_PSEAE
35 HHSearch 55.4124% -71 - C4 -1W2L - ? -
24 HHSearch 50.7022% -63 - C4 -3MK7 - ? -
6 PsiBlast_PDB 50.1023% -83 - C4 -3ZOX - CY552_NITEU -
29 HHSearch 49.5121% -53 - C4 -1JDL - CYC22_RHOCE -
27 HHSearch 49.4720% -67 - C4 -1H32 - ? -
23 HHSearch 49.2320% -74 - C4 -2EXV - CY551_PSEAE -
42 HHSearch 49.1326% -60 - C4 -3M97 - CY552_PARDE -
48 Fugue 48.9620% -55 - C4 -4PWA - ? -
37 HHSearch 48.4129% -60 - C4 -1QN2 - ? -
28 HHSearch 47.9521% -61 - C4 -3C2C - CYC2_RHORU -
38 HHSearch 47.7924% -67 - C4 -3CP5 - ? -
7 PsiBlast_PDB 47.2223% -83 - C4 -3ZOY - CY552_NITEU -
50 Fugue 46.9722% -63 - C3 -1ZTD - ? -