@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0552: (2016-01-09 )
MTVLKMTDLDLKGKRVLIREDLNVPVKDGQVQSDARIKAALPTLKLALEKGAAVMVCSHLGRPTEGEFSAENSLKPVAEYLSKALGREVPLLADYLDGVEVKAGDLVLFENVRFNKGEKKNADELAQKYAALCDVFVMDAFGTAHRAEGSTHGVARFAKVAAAGPLLAAELDALGKALGNPARPMAAIVAGSKVSTKLDVLNSLAGICDQLIVGGGIANTFLAAAGHKVGKSLYEADLVETAKAIAAKVKVPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIADSAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILEQRAKG

Atome Classification :

(60 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




ADP_A_5(2WZC)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(4AXX)
PGK1_HUMAN
[Raw transfer]




ADP_A_5(2WZD)
PGK1_HUMAN
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(1VJD)
PGK1_PIG
[Raw transfer]




ACP_A_4(2X14)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(2X13)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(2PAA)
PGK2_MOUSE
[Raw transfer]




ADP_A_3(2X15)
PGK1_HUMAN
[Raw transfer]




ADP_A_3(2XE7)
PGK1_HUMAN
[Raw transfer]




ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]




ADP_A_6(3ZOZ)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(1VJC)
PGK1_PIG
[Raw transfer]




ADP_C_9(4NG4)
PGK_COXBU
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




ACP_A_4(1KF0)
PGK1_PIG
[Raw transfer]




ADP_B_7(4NG4)
PGK_COXBU
[Raw transfer]




LA8_D_8(2Y3I)
PGK1_HUMAN
[Raw transfer]




LA8_A_5(2Y3I)
PGK1_HUMAN
[Raw transfer]




ADP_A_2(2ZGV)
PGK1_HUMAN
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




LA8_A_4(2YBE)
PGK1_HUMAN
[Raw transfer]




ACP_A_3(2XE8)
PGK1_HUMAN
[Raw transfer]




AMP_A_2(1HDI)
PGK1_PIG
[Raw transfer]




ADP_B_6(3C3A)
PGK1_HUMAN
[Raw transfer]




CDP_A_5(3C3C)
PGK1_HUMAN
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]




FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]




CDF_B_5(3C3B)
PGK1_HUMAN
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




3PG_A_5(3ZOZ)
PGK1_HUMAN
[Raw transfer]




3PG_A_3(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_4(3C3A)
PGK1_HUMAN
[Raw transfer]




3PG_B_4(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_2(2XE6)
PGK1_HUMAN
[Raw transfer]




3PG_A_3(1KF0)
PGK1_PIG
[Raw transfer]




3PG_A_2(2P9T)
PGK2_MOUSE
[Raw transfer]




3PG_B_6(3C3C)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(3PGK)
PGK_YEAST
[Raw transfer]




3PG_B_6(2CUN)
PGK_PYRHO
[Raw transfer]




TZN_A_2(4O33)
PGK1_HUMAN
[Raw transfer]




TZN_A_2(4O3F)
PGK1_MOUSE
[Raw transfer]




3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_B_4(2PAA)
PGK2_MOUSE
[Raw transfer]




1 PsiBlast_PDB 98.3874%-118 - C9 -5BT8 - ? -
60 HHSearch 96.9371%-119 - C9 -1ZMR - PGK_ECOLI -
2 PsiBlast_PDB 96.6370%-119 - C9 -1ZMR - PGK_ECOLI -
3 PsiBlast_PDB 92.4560%-112 - C9 -4FEY - PGK_FRATT -
4 PsiBlast_PDB 92.3159%-116 - C9 -4EHJ - PGK_FRATT -
22 PsiBlast_CBE 91.2657%-112 - C9 -4NG4 6.7 PGK_COXBU
21 PsiBlast_CBE 91.2657%-114 - C9 -4NG4 7.1 PGK_COXBU
5 PsiBlast_PDB 89.5257%-109 - C9 -4NG4 - PGK_COXBU -
7 PsiBlast_PDB 85.0747%-100 - C9 -1VPE 8.5 PGKT_THEMA
65 HHSearch 84.9647% -98 - C9 -1VPE 8.5 PGKT_THEMA
62 HHSearch 84.9548%-105 - C9 -1PHP 7.8 PGK_GEOSE
6 PsiBlast_PDB 84.8147%-106 - C9 -1PHP - PGK_GEOSE -
53 PsiBlast_CBE 83.7438%-114 - C9 -3OZ7 - PGK_PLAF7 -
8 PsiBlast_PDB 83.4843%-107 - C9 -4DG5 - PGK_STAAR -
54 PsiBlast_CBE 82.9138%-111 - C9 -3OZ7 - PGK_PLAF7 -
61 HHSearch 82.6242%-104 * C9 *3Q3V 3.1 PGK_CAMJE
63 HHSearch 82.5046%-103 - C9 -1V6S - PGK_THET8 -
12 PsiBlast_PDB 82.3841%-104 - C9 -3Q3V 3.1 PGK_CAMJE
11 PsiBlast_PDB 81.9340%-103 - C9 -13PK - PGKC_TRYBB -
41 PsiBlast_CBE 81.9039%-109 - C9 -1VJD 5.8 PGK1_PIG
42 PsiBlast_CBE 81.0639%-107 - C9 -1VJC 5.8 PGK1_PIG
69 HHSearch 80.9542%-105 - C9 -1QPG 8.0 PGK_YEAST
18 PsiBlast_PDB 80.5239%-105 - C9 -4O3F 6.9 PGK1_MOUSE
48 PsiBlast_CBE 80.5041%-108 - C9 -1QPG 8.0 PGK_YEAST
43 PsiBlast_CBE 79.6339%-100 - C9 -1KF0 5.7 PGK1_PIG
29 PsiBlast_CBE 79.5439% -98 - C9 -3ZOZ 7.8 PGK1_HUMAN
64 HHSearch 79.0240% -99 - C9 -2WZB 8.4 PGK1_HUMAN
31 PsiBlast_CBE 78.8239% -99 - C9 -2XE8 4.9 PGK1_HUMAN
19 PsiBlast_PDB 78.8039% -99 - C9 -2XE6 5.7 PGK1_HUMAN
44 PsiBlast_CBE 78.7739% -99 - C9 -4O33 6.2 PGK1_HUMAN
16 PsiBlast_PDB 78.7039%-100 - C9 -2X15 7.8 PGK1_HUMAN
14 PsiBlast_PDB 78.6339%-100 - C9 -2WZC 8.0 PGK1_HUMAN
51 PsiBlast_CBE 78.6238%-102 - C9 -2P9T 4.9 PGK2_MOUSE
56 PsiBlast_CBE 78.5834%-103 - C9 -2CUN 2.4 PGK_PYRHO
13 PsiBlast_PDB 78.2739%-100 - C9 -2WZB 8.4 PGK1_HUMAN
46 PsiBlast_CBE 78.1139% -99 - C9 -2WZD 6.9 PGK1_HUMAN
39 PsiBlast_CBE 78.0139%-103 - C9 -3C39 5.3 PGK1_HUMAN
50 PsiBlast_CBE 77.9538%-104 - C9 -2PAA 5.8 PGK2_MOUSE
55 PsiBlast_CBE 77.8134%-101 - C9 -2CUN 2.8 PGK_PYRHO
45 PsiBlast_CBE 77.7739% -98 - C9 -2X14 8.5 PGK1_HUMAN
40 PsiBlast_CBE 77.4239%-103 - C9 -2ZGV 5.3 PGK1_HUMAN
67 HHSearch 77.3837% -96 - C9 -2CUN 2.5 PGK_PYRHO
20 PsiBlast_PDB 77.1439% -96 - C9 -2XE7 6.4 PGK1_HUMAN
49 PsiBlast_CBE 77.0938%-106 - C9 -2PAA 3.8 PGK2_MOUSE
15 PsiBlast_PDB 76.8539% -97 - C9 -2X13 7.2 PGK1_HUMAN
37 PsiBlast_CBE 76.8339%-101 - C9 -3C3A 3.8 PGK1_HUMAN
34 PsiBlast_CBE 76.6039%-103 - C9 -3C3B 3.9 PGK1_HUMAN
17 PsiBlast_PDB 76.4739% -93 - C9 -2Y3I 6.7 PGK1_HUMAN
33 PsiBlast_CBE 76.4539%-101 - C9 -3C3C 4.1 PGK1_HUMAN
36 PsiBlast_CBE 76.1839%-100 - C9 -3C3A 5.4 PGK1_HUMAN
52 PsiBlast_CBE 75.9238%-105 - C9 -1HDI 5.9 PGK1_PIG
28 PsiBlast_CBE 75.9039% -99 - C9 -4AXX 7.9 PGK1_HUMAN
38 PsiBlast_CBE 75.6639% -98 - C9 -3C39 5.5 PGK1_HUMAN
27 PsiBlast_CBE 75.1439% -93 - C9 -2Y3I 6.9 PGK1_HUMAN
32 PsiBlast_CBE 75.0439%-100 - C9 -3C3C 4.7 PGK1_HUMAN
30 PsiBlast_CBE 74.9239% -98 - C9 -2YBE 7.7 PGK1_HUMAN
70 HHSearch 66.5939% -95 - C9 -1FW8 2.7 PGK_YEAST
57 PsiBlast_CBE 65.3839% -99 - C9 -1FW8 2.7 PGK_YEAST
47 PsiBlast_CBE 38.3240% 1 - C9 -3PGK 1.9 PGK_YEAST
71 HHSearch 35.4353% -69 - C9 -1FW8 2.9 PGK_YEAST