@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0651: (2016-01-13 )
MSVPTVLQKILARKAEEVAERRARVNLAEVERLARSADAPRGFANALLERAKRKEPAVIAEIKKASPSKGVLREHFVPAEIARSYEAGGAACLSVLTDVDFFQGADAYLKEARAACALPVIRKDFMIDPYQIVEARAIGADCILLIVSALDDVLMAELAATAKSVGLDVLVEVHDGTELERALKTLDTPLVGINNRNLHTFEVSLETTLDLLPEIPRDRLVVTESGILNRADVELMEVSEVYAFLVGEAFMRADDPGLELKRLFFQERGAVVLGADPD

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

137_P_8(1JCM)
TRPC_ECOLI
[Raw transfer]



137_B_2(1LBL)
TRPC_SULSO
[Raw transfer]



137_B_2(1LBF)
TRPC_SULSO
[Raw transfer]



IGP_A_2(3T44)
TRPC_MYCTU
[Raw transfer]



4RG_A_2(3T55)
TRPC_MYCTU
[Raw transfer]



BE2_A_3(3T44)
TRPC_MYCTU
[Raw transfer]



UNL_B_6(3TSM)
TRPC_BRUA2
[Raw transfer]



5RG_A_2(3T78)
TRPC_MYCTU
[Raw transfer]



MES_B_2(1JUL)
TRPC_SULSO
[Raw transfer]



ACY_B_14(1VC4)
?
[Raw transfer]



IGP_B_2(1A53)
TRPC_SULSO
[Raw transfer]
1 HHSearch 96.8649%-117 - C2 -3TSM - TRPC_BRUA2 -
22 PsiBlast_PDB 95.7452%-121 - C2 -3TSM - TRPC_BRUA2 -
42 PsiBlast_CBE 95.0152%-115 - C2 -3TSM 2.8 TRPC_BRUA2
46 Fugue 91.8941%-116 - C2 -1PII - ? -
3 HHSearch 91.2441%-105 - C2 -1PII - TRPC_ECOLI -
29 PsiBlast_PDB 91.0540% -94 - C2 -1JCM 7.6 TRPC_ECOLI
23 PsiBlast_PDB 89.7140% -94 - C2 -1PII - TRPC_ECOLI -
5 HHSearch 88.2842%-106 - C2 -1VC4 - ? -
30 PsiBlast_PDB 87.2739% -97 - C2 -4FB7 - TRPC_MYCTU -
27 PsiBlast_PDB 86.0239% -98 - C2 -3T55 5.8 TRPC_MYCTU
25 PsiBlast_PDB 85.9639%-105 - C2 -3T40 - TRPC_MYCTU -
2 HHSearch 85.9239%-108 - C2 -3QJA - TRPC_MYCTU -
26 PsiBlast_PDB 85.7339% -96 - C2 -3T44 6.3 TRPC_MYCTU
24 PsiBlast_PDB 85.3439%-111 - C2 -3QJA - TRPC_MYCTU -
28 PsiBlast_PDB 84.9939% -99 - C2 -3T78 3.3 TRPC_MYCTU
31 PsiBlast_PDB 83.9540% -97 - C2 -1VC4 - ? -
43 PsiBlast_CBE 82.9140% -97 - C2 -1VC4 3.1 ?
4 HHSearch 82.4534% -98 - C2 -1I4N - TRPC_THEMA -
44 PsiBlast_CBE 77.7136%-107 - C2 -1I4N - TRPC_THEMA -
32 PsiBlast_PDB 77.4436%-105 - C2 -1I4N - TRPC_THEMA -
39 PsiBlast_PDB 74.1935%-107 - C2 -1A53 6.0 TRPC_SULSO
37 PsiBlast_PDB 73.3635%-105 - C2 -1LBF 7.4 TRPC_SULSO
36 PsiBlast_PDB 73.1535%-103 - C2 -1JUL 2.3 TRPC_SULSO
38 PsiBlast_PDB 73.1135%-104 - C2 -1LBL 7.0 TRPC_SULSO