@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0755: (2016-01-18 )
MSTSLPQAARSVRSSRSTTLTTTAVVLAGIAPLGNAAGFLEDSKASLETRNFYMNRDFRDGPGQSKREEWAQGFILNLQSGYTQGTVGFGLDAMGMLGVKLDSGRGRSGTGLLPKDSDGRAPDTYSKLGLTAKVKVSQSELKVGTLIPKLPSVQPNNGRIFPQIFEGALLTSKEIKDLGFTAGRLEKTKIRDSSDSEDLALNDKNGRFAGVSADHFDLGGLDYKLTDQLTASYHYSNLQDVYRQHFVGLLHSWPIGPGELTSDLRFARSTDSGSAKAGGIDNKSLNGMFTYSLGNHAFGAAWQRMNGDDAFPYLEGSNPYLVNFVQVNDFAGPKERSWQLRYDYDFVGLGIPGLTFMTRYVKGDNVELAGQSGEGREWERNTELQYVFQSGALKNLGIRWRNATFRSNFTRDIDENRLIVSYTLPIW

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C8E_B_4(3SZD)
?
[Raw transfer]



C8E_A_7(2Y0K)
?
[Raw transfer]



C8E_B_5(3SZD)
?
[Raw transfer]



C8E_B_9(4FRX)
?
[Raw transfer]



C8E_A_9(2Y0H)
?
[Raw transfer]



C8E_A_3(4FSP)
?
[Raw transfer]



C8E_A_9(2ODJ)
PORD_PSEAE
[Raw transfer]



C8E_A_5(4FRX)
?
[Raw transfer]



C8E_A_9(2Y2X)
?
[Raw transfer]



C8E_B_24(2Y2X)
?
[Raw transfer]



C8E_A_9(3SYS)
?
[Raw transfer]



C8E_A_9(2Y2X)
?
[Raw transfer]



C8E_B_24(3SYS)
?
[Raw transfer]



C8E_A_12(3T24)
?
[Raw transfer]



C8E_B_5(2QTK)
?
[Raw transfer]



C8E_B_9(4FMS)
?
[Raw transfer]



C8E_A_9(2Y0K)
?
[Raw transfer]



C8E_B_9(4FMS)
?
[Raw transfer]



C8E_A_8(2QTK)
?
[Raw transfer]



C8E_A_9(3SZV)
?
[Raw transfer]



C8E_A_2(3SY7)
PORD_PSEAE
[Raw transfer]



C8E_B_5(3SZD)
?
[Raw transfer]



C8E_A_5(4FT6)
?
[Raw transfer]
1 PsiBlast_PDB 98.40100% -30 - C7 -2Y0L - ? -
2 PsiBlast_PDB 98.15100% -31 - C7 -3T20 - ? -
55 HHSearch 97.5399% -28 - C7 -2Y0L - ? -
4 PsiBlast_PDB 88.8058% -31 - C7 -4FSP 2.5 ?
3 PsiBlast_PDB 87.6959% -24 - C7 -3T24 - ? -
21 PsiBlast_CBE 87.3759% -28 - C7 -3T24 - ? -
22 PsiBlast_CBE 86.8359% -27 - C7 -3T24 - ? -
9 PsiBlast_PDB 86.4952% -27 - C7 -3T0S - ? -
8 PsiBlast_PDB 86.4952% -27 - C7 -2Y0H - ? -
59 HHSearch 84.7451% -26 - C7 -2Y0H 2.9 ?
60 HHSearch 84.2956% -17 - C7 -3T24 4.1 ?
10 PsiBlast_PDB 83.9548% -23 - C7 -4FRX 3.0 ?
23 PsiBlast_CBE 83.7348% -20 - C7 -4FRX 2.5 ?
7 PsiBlast_PDB 83.4954% -25 - C7 -3SZV - ? -
27 PsiBlast_CBE 82.0244% -15 - C7 -3SYS 3.9 ?
56 HHSearch 81.8552% -24 - C7 -3SZV 1.8 ?
12 PsiBlast_PDB 81.6944% -21 - C7 -4FMS 1.9 ?
11 PsiBlast_PDB 81.6648% -16 - C7 -4FT6 2.4 ?
18 PsiBlast_PDB 81.4137% -16 - C7 -3SY7 2.1 PORD_PSEAE
6 PsiBlast_PDB 81.2354% -21 - C7 -2Y0K 2.5 ?
53 HHSearch 80.9944% -23 * C7 *2Y2X 2.2 ?
19 PsiBlast_PDB 80.8937% -19 - C7 -2ODJ 2.5 PORD_PSEAE
25 PsiBlast_CBE 80.6444% -19 - C7 -3SZD 2.4 ?
17 PsiBlast_PDB 80.1844% -16 - C7 -3SYS 2.1 ?
13 PsiBlast_PDB 80.1744% -19 - C7 -3SZD 2.1 ?
16 PsiBlast_PDB 80.0544% -17 - C7 -2Y2X 2.2 ?
28 PsiBlast_CBE 80.0444% -12 - C7 -2Y2X 4.0 ?
24 PsiBlast_CBE 79.9344% -21 - C7 -4FMS 1.9 ?
15 PsiBlast_PDB 79.6944% -15 - C7 -2QTK 2.7 ?
29 PsiBlast_CBE 77.4744% -15 - C7 -2QTK Error ?