@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0782: (2016-01-19 )
MFKASHVLQGEDQTRSAAEFFPVISANYAVDEEAYLGELLQLADPGPDGIEAIRRNARALIETVRSRDNAVDTLDALLRQYSLDTQEGLMLMCLAEALLRVPDAATADALIRDKLSAADWQRHLGQSDNVLVNFAAWGLVMTGKVVNIDERTDGRAPSVISRLVQRSGEPVIRAAMNQAMKLMGKQFVLGRTISEALKNGRPCREQGYTYSFDMLGEAALTAADAEKYMADYRQAIDTVGAEPQVGPGPRPSISIKLSALHPRYEVAQRERVLSELFANVLELAVRARKLNVGITIDAEEADRLELSLELYEKLMRDPAIAGWGEFGLVIQAYSKRCLPVLVWLTLLGRELGARIPLRLVKGAYWDSEIKQCQVQGADGYPVYTRKEGTDTSYLACARYLLSEHTRGVIYPQFASHNAHTVTAILALADEARAAGGEERDFEFQRLHGMGDALYDTVIEKYRRNVRIYAPVGAHKDLLPYLVRRLLENGANSSFVHKLVDPRVPVETLIQHPVTQLRQFKTLANDRIPLPQAIFGAGRKNSQGINMNIQNQWNELELAYKPHLTRQWQAAPIVNGEKLSGPAHEVRCPYDLERLVGSVQYASAEQAGKALDVLQAAWPRWSATPVDERAGILERLADLLEAQRGELMALCTLEAGKSLQDGIDEIREAVDFCRYYAQQARQRLVREELRGPTGERNELFYEGRGIFACVSPWNFPLAIFLGQISAALVAGNTVLAKPAEQTSLIAARTVELMFEAGLPKDVIALLPGDGATLGGVFCRDARVAGVAFTGSTDTARIINRQLAEKPGAIATLIAETGGQNAMIVDSTALPEQVIKDAVQSAFTSAGQRCSALRVMYVQQDIAERVIELLKGAMAELKVGPTEVRVSDVGPVIDAEAKAGLEQHIAALKAAGKLIAETKVPGNLNGHFVAPVAFEISGIDELKKENFGPVLHVVRYAAQDLEKVVQAINATGFGLTMGVHSRNEETARRIEELARVGNLYINRNQIGAVVGVQPFGGHGLSGTGPKAGGPNYLLRFVSERTTSVNTTAVGGNASLLSLADAE

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ALA_B_11(2EIT)
?
[Raw transfer]



ALA_A_9(2EIT)
?
[Raw transfer]



DPR_A_7(2EJ6)
?
[Raw transfer]



GLU_A_3(2BHQ)
?
[Raw transfer]



PRO_B_8(2EIW)
?
[Raw transfer]



NAD_B_12(2EIT)
?
[Raw transfer]



DPR_B_8(2EJ6)
?
[Raw transfer]



GLU_B_4(2BHQ)
?
[Raw transfer]



NAD_A_10(2EHU)
?
[Raw transfer]



NAD_A_5(2J5N)
?
[Raw transfer]



NAD_B_13(2J5N)
?
[Raw transfer]



NAD_A_3(2BJK)
?
[Raw transfer]



GLY_A_3(2J5N)
?
[Raw transfer]



NAD_B_10(2BJK)
?
[Raw transfer]



NAD_A_10(2EII)
?
[Raw transfer]



NAP_B_10(2EHQ)
?
[Raw transfer]



NAD_B_15(2BHP)
?
[Raw transfer]



NAD_A_3(2BHP)
?
[Raw transfer]



NAP_A_9(2EHQ)
?
[Raw transfer]



NAD_B_12(2EHU)
?
[Raw transfer]



NAD_B_12(2EII)
?
[Raw transfer]



GLY_B_4(2J5N)
?
[Raw transfer]



FLC_B_11(2IY6)
?
[Raw transfer]



FLC_A_3(2IY6)
?
[Raw transfer]
74 Fugue 95.9851% -86 - C3 -4Q71 - ? -
84 HHSearch 95.1351% -86 - C3 -3HAZ - ? -
1 PsiBlast_PDB 94.8349% -86 - C3 -3HAZ - ? -
9 PsiBlast_PDB 63.4634% -78 - C3 -3QAN - ROCA1_BACHD -
21 PsiBlast_CBE 63.0534% -80 - C3 -3QAN - ROCA1_BACHD -
22 PsiBlast_CBE 62.9532% -75 - C3 -3RJL - ROCA_BACLD -
26 PsiBlast_CBE 62.4732% -74 - C3 -3RJL - ROCA_BACLD -
27 PsiBlast_CBE 62.2232% -73 - C3 -3RJL - ROCA_BACLD -
28 PsiBlast_CBE 61.8432% -75 - C3 -3RJL - ROCA_BACLD -
10 PsiBlast_PDB 61.3732% -73 - C3 -3RJL - ROCA_BACLD -
17 PsiBlast_PDB 61.2137% -77 - C3 -2EJ6 3.1 ?
19 PsiBlast_PDB 61.1237% -77 - C3 -2J5N 9.6 ?
16 PsiBlast_PDB 60.9737% -76 - C3 -2EHQ 9.8 ?
34 PsiBlast_CBE 60.8537% -76 - C3 -2EIT 8.1 ?
33 PsiBlast_CBE 60.6337% -76 - C3 -2EJ6 2.8 ?
13 PsiBlast_PDB 60.5737% -75 - C3 -2BHP 8.9 ?
15 PsiBlast_PDB 60.4637% -77 - C3 -2IY6 3.5 ?
36 PsiBlast_CBE 60.3937% -75 - C3 -2EII 9.0 ?
39 PsiBlast_CBE 60.3637% -77 - C3 -2EHQ 9.7 ?
30 PsiBlast_CBE 60.3637% -75 - C3 -1UZB - ? -
32 PsiBlast_CBE 60.1637% -77 - C3 -2IY6 3.4 ?
20 PsiBlast_PDB 60.1637% -76 - C3 -2EIT 2.7 ?
18 PsiBlast_PDB 60.1137% -76 - C3 -2BHQ 3.7 ?
38 PsiBlast_CBE 60.0737% -75 - C3 -2EHU 9.0 ?
29 PsiBlast_CBE 60.0337% -76 - C3 -2EIW 3.4 ?
42 PsiBlast_CBE 60.0137% -74 - C3 -2BHP 9.0 ?
35 PsiBlast_CBE 59.9737% -75 - C3 -2EII 9.1 ?
31 PsiBlast_CBE 59.8037% -76 - C3 -2J5N 9.1 ?
37 PsiBlast_CBE 59.7737% -76 - C3 -2EHU 9.0 ?
14 PsiBlast_PDB 59.7637% -75 - C3 -2BJK 9.2 ?
40 PsiBlast_CBE 59.6237% -75 - C3 -2BJK 9.2 ?
41 PsiBlast_CBE 59.5837% -76 - C3 -2BHQ 3.7 ?