@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0785: (2016-01-19 )
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_B_7(2V9C)
AZOR1_PSEAE
[Raw transfer]




FMN_B_7(3LT5)
AZOR1_PSEAE
[Raw transfer]




FMN_B_8(4N65)
AZOR1_PSEAE
[Raw transfer]




FMN_B_12(3R6W)
AZOR1_PSEAE
[Raw transfer]




FMN_A_3(3LT5)
AZOR1_PSEAE
[Raw transfer]




FMN_B_7(4N9Q)
AZOR1_PSEAE
[Raw transfer]




FMN_A_3(3R6W)
AZOR1_PSEAE
[Raw transfer]




FMN_B_7(3KEG)
AZOR1_PSEAE
[Raw transfer]




FMN_A_3(2V9C)
AZOR1_PSEAE
[Raw transfer]




25 PsiBlast_CBE 95.39100%-132 - C1 -2V9C 9.8 AZOR1_PSEAE
24 PsiBlast_CBE 95.32100%-125 - C1 -3LT5 9.9 AZOR1_PSEAE
1 PsiBlast_PDB 94.90100%-122 * C1 *3LT5 10.6 AZOR1_PSEAE
2 PsiBlast_PDB 93.03100%-117 - C1 -3R6W 10.5 AZOR1_PSEAE
3 PsiBlast_PDB 92.36100%-127 - C1 -2V9C 9.1 AZOR1_PSEAE
26 PsiBlast_CBE 91.7599%-122 - C1 -3KEG 9.2 AZOR1_PSEAE
23 PsiBlast_CBE 91.52100%-123 - C1 -3R6W 10.2 AZOR1_PSEAE
22 PsiBlast_CBE 91.48100%-124 - C1 -4N65 9.9 AZOR1_PSEAE
21 PsiBlast_CBE 91.23100%-123 - C1 -4N9Q 9.5 AZOR1_PSEAE
101 Fugue 65.6332%-108 - C1 -1TIK - AZOR_ECOLI -
10 PsiBlast_PDB 64.4037%-119 - C1 -2Z9D - AZOR_ECOLI -
27 PsiBlast_CBE 64.1237%-119 - C1 -2Z9D - AZOR_ECOLI -
110 HHSearch 63.4834%-112 - C1 -1T5B - AZOR_SALTY -
7 PsiBlast_PDB 63.2437%-119 - C1 -2Z98 - AZOR_ECOLI -
5 PsiBlast_PDB 62.0637%-117 - C1 -1V4B - AZOR_ECOLI -
6 PsiBlast_PDB 61.7137%-115 - C1 -2D5I - AZOR_ECOLI -
11 PsiBlast_PDB 61.6036%-121 - C1 -1TIK - AZOR_ECOLI -
8 PsiBlast_PDB 61.4237%-117 - C1 -2Z9B - AZOR_ECOLI -
113 HHSearch 61.1525%-106 - C1 -3W77 - ? -
9 PsiBlast_PDB 61.0337%-119 - C1 -2Z9C - AZOR_ECOLI -