@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0892: (2016-01-23 )
MYKLEVQDLHKRYGSHEVLKGVSLAAKAGDVISIIGSSGSGKSTFLRCINLLEQPHAGKILLNGEELKLVPGRDGALKAADSRQLQRMRSRLSMVFQHFNLWSHMSALENVIEAPVHVLGVSKKEAIEKAEHYLAKVGVAHRKDAYPAHMSGGEQQRVAIARALAVEPEVMLFDEPTSALDPELVGEVLKVMQDLAQEGRTMVVVTHEMGFAREVSNQLVFLHKGLVEEHGCPKEVLANPQSDRLKQFLSGSLK

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]
122 HHSearch 98.6170%-107 - C1 -1B0U - HISP_SALTY -
1 PsiBlast_PDB 98.5169%-107 - C1 -1B0U 6.1 HISP_SALTY
102 Fugue 95.1369%-113 - C1 -1B0U 5.7 HISP_SALTY
5 PsiBlast_PDB 86.0953%-112 - C1 -4YMV 5.8 ?
22 PsiBlast_CBE 85.5053%-110 - C1 -4YMU 5.9 ?
3 PsiBlast_PDB 84.8153%-110 - C1 -4YMT - ? -
26 PsiBlast_CBE 84.7151%-106 - C1 -2OUK - ? -
2 PsiBlast_PDB 84.6953%-110 - C1 -4YMS - ? -
6 PsiBlast_PDB 84.6253%-113 - C1 -4YMW - ? -
21 PsiBlast_CBE 84.5253%-110 - C1 -4YMV 5.2 ?
29 PsiBlast_CBE 84.5051%-107 - C1 -2OLK 6.3 ?
4 PsiBlast_PDB 84.1453%-106 - C1 -4YMU 6.2 ?
34 PsiBlast_CBE 84.1050%-103 - C1 -4U02 - ? -
24 PsiBlast_CBE 83.9051%-107 - C1 -3C4J 5.3 ?
10 PsiBlast_PDB 83.8451%-108 - C1 -2OUK - ? -
30 PsiBlast_CBE 83.8051%-104 - C1 -2OLK 6.6 ?
33 PsiBlast_CBE 83.7350%-101 - C1 -4U02 - ? -
8 PsiBlast_PDB 83.5051%-108 - C1 -2OLJ 5.9 ?
14 PsiBlast_PDB 83.4950%-100 - C1 -4U02 - ? -
121 HHSearch 83.4853%-104 - C1 -2OLJ - ? -
7 PsiBlast_PDB 83.2851%-102 - C1 -3C41 6.7 ?
13 PsiBlast_PDB 82.8650%-102 - C1 -4U00 6.0 ?
31 PsiBlast_CBE 82.5851%-105 - C1 -2OLK 6.5 ?
23 PsiBlast_CBE 82.5851%-103 - C1 -3C41 6.1 ?
9 PsiBlast_PDB 82.5851%-104 - C1 -2OLK 6.5 ?
12 PsiBlast_PDB 82.1851%-102 - C1 -3C4J 6.8 ?
11 PsiBlast_PDB 82.1551%-102 - C1 -2Q0H 5.7 ?
25 PsiBlast_CBE 82.0051%-107 - C1 -2Q0H 6.1 ?
32 PsiBlast_CBE 80.1251%-103 - C1 -2OLJ 5.8 ?
97 PsiBlast_CBE 62.3631% -96 - C1 -4AYX 5.8 ABCBA_HUMAN
51 PsiBlast_CBE 59.2336%-100 - C1 -3TIF 4.1 Y796_METJA
50 PsiBlast_CBE 57.2036%-102 - C1 -3TIF 4.2 Y796_METJA