@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0944: (2016-01-25 )
MPKLCNVVVLISGSGSNLQALIDSLRDGATPARIRAVISNRADAYGLERARQAGIQTEVLDHKAYADRESFDEALAQRIDAHEPHLVILAGFMRILSADFVRHYQGRLLNIHPSLLPRHKGLHTHQRALEAGDREHGCSVHFVTEELDGGPLVVQAVIPVESQDTPERLARRVHEEEHRIYPLAMRWFAEGRLRLGEQGALLDGQALPATGHQIRTKEIRNA

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KEU_N_14(1RBQ)

[Raw transfer]



KEU_F_6(1RBY)
PUR2_HUMAN
[Raw transfer]



KT5_H_8(1RBM)

[Raw transfer]



KEU_L_12(1RBQ)
PUR2_HUMAN
[Raw transfer]



KT3_E_5(1RC1)
PUR2_HUMAN
[Raw transfer]



KEU_H_8(1RBY)

[Raw transfer]



KEU_M_13(1RBQ)
PUR2_HUMAN
[Raw transfer]



KT5_D_4(1RC0)

[Raw transfer]



KEU_G_7(1NJS)

[Raw transfer]



KT3_F_6(1RC1)

[Raw transfer]



KEU_G_7(1RBY)
PUR2_HUMAN
[Raw transfer]



KT5_D_4(1RBZ)

[Raw transfer]



GOL_A_6(4DS3)
?
[Raw transfer]



GOL_B_6(3KCQ)
?
[Raw transfer]



GOL_A_5(3KCQ)
?
[Raw transfer]



GOL_A_5(3KCQ)
?
[Raw transfer]



GOL_C_7(3KCQ)
?
[Raw transfer]



GOL_D_8(3KCQ)
?
[Raw transfer]



138_E_5(1JKX)
PUR3_ECOLI
[Raw transfer]



GAR_J_10(1RBY)
PUR2_HUMAN
[Raw transfer]



GRF_B_2(1ZLY)

[Raw transfer]



NHE_A_2(3TQR)
?
[Raw transfer]
101 HHSearch 96.6258%-133 - C5 -1JKX 10.3 PUR3_ECOLI
7 PsiBlast_PDB 96.4158%-130 - C5 -1CDE - PUR3_ECOLI -
6 PsiBlast_PDB 96.4058%-131 - C5 -1JKX - PUR3_ECOLI -
26 PsiBlast_CBE 96.2958%-130 - C5 -1CDE - PUR3_ECOLI -
23 PsiBlast_CBE 96.2958%-129 - C5 -1JKX - PUR3_ECOLI -
21 PsiBlast_CBE 96.2258%-133 - C5 -1JKX - PUR3_ECOLI -
28 PsiBlast_CBE 96.2158%-130 - C5 -1CDE - PUR3_ECOLI -
27 PsiBlast_CBE 96.1458%-130 - C5 -1CDE - PUR3_ECOLI -
30 PsiBlast_CBE 96.0458%-132 - C5 -1C2T - PUR3_ECOLI -
22 PsiBlast_CBE 95.9158%-128 - C5 -1JKX - PUR3_ECOLI -
31 PsiBlast_CBE 95.8758%-132 - C5 -1C3E - PUR3_ECOLI -
9 PsiBlast_PDB 95.2458%-133 - C5 -1C3E - PUR3_ECOLI -
5 PsiBlast_PDB 94.9558%-132 - C5 -1C2T - PUR3_ECOLI -
2 PsiBlast_PDB 94.1559%-127 - C5 -3GAR - PUR3_ECOLI -
10 PsiBlast_PDB 93.8854%-131 - C5 -3TQR 3.2 ?
8 PsiBlast_PDB 93.3058%-145 - C5 -1CDD - PUR3_ECOLI -
29 PsiBlast_CBE 92.4958%-147 - C5 -1CDD - PUR3_ECOLI -
1 PsiBlast_PDB 92.0559%-146 - C5 -2GAR - PUR3_ECOLI -
14 PsiBlast_PDB 91.6049%-138 - C5 -1MEO - -
36 PsiBlast_CBE 91.1949%-133 - C5 -4EW3 - -
50 PsiBlast_CBE 91.0849%-135 - C5 -1RBM 5.9
48 PsiBlast_CBE 90.9349%-135 - C5 -1RBQ 5.5 PUR2_HUMAN
41 PsiBlast_CBE 90.8949%-133 - C5 -1RC1 6.8 PUR2_HUMAN
40 PsiBlast_CBE 90.8549%-136 - C5 -1RC1 6.1
45 PsiBlast_CBE 90.7949%-134 - C5 -1RBY 7.0 PUR2_HUMAN
47 PsiBlast_CBE 90.7649%-132 - C5 -1RBQ 6.9
51 PsiBlast_CBE 90.6049%-136 - C5 -1NJS 5.7
46 PsiBlast_CBE 90.5449%-132 - C5 -1RBY 7.6 PUR2_HUMAN
49 PsiBlast_CBE 90.5049%-134 - C5 -1RBQ 6.1 PUR2_HUMAN
42 PsiBlast_CBE 90.2449%-132 - C5 -1RC0 5.5
44 PsiBlast_CBE 90.1349%-132 - C5 -1RBY 6.9
43 PsiBlast_CBE 90.1249%-132 - C5 -1RBZ 6.3
39 PsiBlast_CBE 89.1449%-131 - C5 -1ZLY 3.2
52 PsiBlast_CBE 88.4951%-132 - C5 -4DS3 2.2 ?
55 PsiBlast_CBE 83.3441%-135 - C5 -3KCQ 2.4 ?
53 PsiBlast_CBE 82.4741%-136 * C5 *3KCQ 2.8 ?
54 PsiBlast_CBE 82.4241%-131 - C5 -3KCQ 2.4 ?
56 PsiBlast_CBE 82.3941%-134 - C5 -3KCQ 2.4 ?
103 HHSearch 81.0841%-133 - C5 -3KCQ 2.4 ?