@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0949: (2016-01-25 )
MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTRFGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLGIPYSEPALLETRGGGTPYGASHFAGADGKRSLDEHELTLCRALGKRLAETAGKLGS

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_5(4LAF)
PNPB_PSEWB
[Raw transfer]




FMN_B_6(4LAF)
PNPB_PSEWB
[Raw transfer]




FMN_C_7(4LAF)
PNPB_PSEWB
[Raw transfer]




FMN_D_8(4LAF)
PNPB_PSEWB
[Raw transfer]




FMN_E_5(1ZWL)
NQOR_PSEAE
[Raw transfer]




FMN_A_3(2R97)
NQOR_ECOLI
[Raw transfer]




FMN_B_4(3B6I)
NQOR_ECOLI
[Raw transfer]




FMN_B_4(3B6M)
NQOR_ECOLI
[Raw transfer]




FMN_B_4(3B6K)
NQOR_ECOLI
[Raw transfer]




FMN_A_3(2R96)
NQOR_ECOLI
[Raw transfer]




144_A_5(3B6M)
NQOR_ECOLI
[Raw transfer]




144_B_6(3B6M)
NQOR_ECOLI
[Raw transfer]




15P_B_9(3B6J)
NQOR_ECOLI
[Raw transfer]




15P_A_8(3B6J)
NQOR_ECOLI
[Raw transfer]




EDO_A_9(2R96)
NQOR_ECOLI
[Raw transfer]




EDO_C_13(2R96)
NQOR_ECOLI
[Raw transfer]




22 PsiBlast_CBE 96.4397%-109 - C1 -2A5L - NQOR_PSEAE -
58 HHSearch 96.06100%-108 - C1 -2A5L - NQOR_PSEAE -
3 PsiBlast_PDB 95.3997%-108 - C1 -2A5L - NQOR_PSEAE -
2 PsiBlast_PDB 95.1899%-105 - C1 -1ZWL 8.3 NQOR_PSEAE
21 PsiBlast_CBE 94.8099%-114 - C1 -1ZWK - NQOR_PSEAE -
1 PsiBlast_PDB 93.5999%-110 - C1 -1ZWK - NQOR_PSEAE -
48 Fugue 91.3198%-106 - C1 -1ZWK - NQOR_PSEAE -
34 PsiBlast_CBE 71.8140% -85 - C1 -3B6M 8.6 NQOR_ECOLI
23 PsiBlast_CBE 71.5746% -94 - C1 -4LAF 7.7 PNPB_PSEWB
11 PsiBlast_PDB 70.7940% -83 - C1 -3B6M 3.1 NQOR_ECOLI
5 PsiBlast_PDB 70.7546% -88 - C1 -4LAF 8.6 PNPB_PSEWB
8 PsiBlast_PDB 70.2540% -81 - C1 -3B6I - NQOR_ECOLI -
12 PsiBlast_PDB 70.0840% -83 - C1 -2R96 7.0 NQOR_ECOLI
36 PsiBlast_CBE 69.7140% -84 - C1 -3B6J 2.9 NQOR_ECOLI
61 HHSearch 69.6242% -82 - C1 -2ZKI - ? -
37 PsiBlast_CBE 69.3240% -82 - C1 -3B6I 8.5 NQOR_ECOLI
13 PsiBlast_PDB 69.2640% -84 - C1 -2R97 9.0 NQOR_ECOLI
14 PsiBlast_PDB 69.1840% -93 - C1 -2RG1 - NQOR_ECOLI -
4 PsiBlast_PDB 69.1546% -86 - C1 -4LA4 - PNPB_PSEWB -
9 PsiBlast_PDB 69.0940% -83 - C1 -3B6J 2.9 NQOR_ECOLI
40 PsiBlast_CBE 68.8240% -79 - C1 -2R96 2.8 NQOR_ECOLI
24 PsiBlast_CBE 68.3746% -91 - C1 -4LAF 8.5 PNPB_PSEWB
25 PsiBlast_CBE 68.1546% -84 - C1 -4LAF 8.6 PNPB_PSEWB
35 PsiBlast_CBE 66.5240% -82 - C1 -3B6K 8.9 NQOR_ECOLI