@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0966: (2016-01-25 )
MIGRLRGTLAEKQPPHLILDVNGVGYEVEVPMTTLYRLPSVGEPVTLHTHLVVREDAHLLYGFAEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSTLVKIPGVGKKTAERLLVELKDRFKAWENMPTIAPLVMEPRASATVSSAEADAVSALIALGFKPQEASRAVAAVPGEDLSSEEMIRQALKGMV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_4(2ZTD)
RUVA_MYCTU
[Raw transfer]




GOL_D_8(2ZTC)
RUVA_MYCTU
[Raw transfer]




GOL_O_15(2H5X)
RUVA_MYCTU
[Raw transfer]




GOL_B_5(2ZTD)
RUVA_MYCTU
[Raw transfer]




GOL_B_6(2ZTC)
RUVA_MYCTU
[Raw transfer]




GOL_A_3(2ZTD)
RUVA_MYCTU
[Raw transfer]




GOL_K_11(2H5X)
RUVA_MYCTU
[Raw transfer]




GOL_M_13(2H5X)
RUVA_MYCTU
[Raw transfer]




GOL_A_5(2ZTC)
RUVA_MYCTU
[Raw transfer]




NACID_B_1(1C7Y)
RUVA_ECOLI
[Raw transfer]

-

3 PsiBlast_PDB 91.5955%-132 - C6 -1HJP - RUVA_ECOLI -
4 PsiBlast_PDB 90.2555%-124 - C6 -1CUK - RUVA_ECOLI -
31 HHSearch 89.5053%-122 - C6 -1CUK - RUVA_ECOLI -
2 PsiBlast_PDB 87.9855%-117 - C6 -1C7Y 3.0 RUVA_ECOLI
5 PsiBlast_PDB 81.1460%-146 - C6 -1D8L - RUVA_ECOLI -
32 HHSearch 79.9932%-131 - C6 -2ZTD 2.0 RUVA_MYCTU
24 PsiBlast_CBE 78.9031%-133 - C6 -2ZTD 2.6 RUVA_MYCTU
28 PsiBlast_CBE 78.5031%-131 - C6 -2H5X 2.0 RUVA_MYCTU
7 PsiBlast_PDB 78.3731%-129 - C6 -2ZTD 2.8 RUVA_MYCTU
29 PsiBlast_CBE 76.7531%-130 - C6 -2H5X 2.1 RUVA_MYCTU
27 PsiBlast_CBE 76.4231%-127 - C6 -2ZTC 2.9 RUVA_MYCTU
25 PsiBlast_CBE 76.2431%-128 - C6 -2ZTC 2.9 RUVA_MYCTU
9 PsiBlast_PDB 76.2431%-131 - C6 -2H5X - RUVA_MYCTU -
6 PsiBlast_PDB 76.2031%-127 - C6 -2ZTC 2.8 RUVA_MYCTU
26 PsiBlast_CBE 75.3831%-124 - C6 -2ZTC - RUVA_MYCTU -
30 PsiBlast_CBE 74.7831%-129 - C6 -2H5X 3.0 RUVA_MYCTU
10 PsiBlast_PDB 65.9332%-122 - C6 -1BVS - RUVA_MYCLE -
8 PsiBlast_PDB 65.8231%-130 - C6 -2ZTE - RUVA_MYCTU -
33 HHSearch 61.5336%-126 - C6 -1IXR - RUVA_THET8 -
11 PsiBlast_PDB 61.2334%-130 - C6 -1IXR - RUVA_THET8 -