@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0999: (2016-01-25 )
MGNPILAGLGFSLPKRQVSNHDLVGRINTSDEFIVERTGVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIPVLDIRAQCSGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDCSDRGRNLSILLGDGAGAVVVSAGESLEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDIQPGQRVLVLTYGSGATWGAALYRKPEEVNRPC

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_5(2EFT)
FABH_ECOLI
[Raw transfer]




COA_A_5(2GYO)
FABH_ECOLI
[Raw transfer]




COA_C_3(1HND)
FABH_ECOLI
[Raw transfer]




MLC_E_5(1HNJ)
FABH_ECOLI
[Raw transfer]




MLC_E_5(1HNJ)
FABH_ECOLI
[Raw transfer]




MLC_E_5(1HNJ)
FABH_ECOLI
[Raw transfer]




BE2_A_3(3H78)
PQSD_PSEAE
[Raw transfer]




BE2_A_3(3H78)
PQSD_PSEAE
[Raw transfer]




COA_A_3(1EBL)
FABH_ECOLI
[Raw transfer]




BE2_B_4(3H78)
PQSD_PSEAE
[Raw transfer]




BE2_B_5(3H78)
PQSD_PSEAE
[Raw transfer]




83 HHSearch 98.24100%-134 - C1 -3H78 3.0 PQSD_PSEAE
2 PsiBlast_PDB 98.0399%-134 - C1 -3H78 3.0 PQSD_PSEAE
1 PsiBlast_PDB 96.07100%-135 - C1 -3H76 - PQSD_PSEAE -
21 PsiBlast_CBE 95.8999%-134 - C1 -3H78 2.6 PQSD_PSEAE
7 PsiBlast_PDB 78.9739%-123 - C1 -2EFT 6.6 FABH_ECOLI
6 PsiBlast_PDB 77.7839%-137 - C1 -1HNK - FABH_ECOLI -
8 PsiBlast_PDB 77.5439%-122 - C1 -2GYO 6.0 FABH_ECOLI
9 PsiBlast_PDB 77.5239%-120 - C1 -3IL9 - FABH_ECOLI -
82 HHSearch 77.1837%-123 - C1 -2EBD - FABH_AQUAE -
4 PsiBlast_PDB 76.8939%-121 - C1 -1HND 7.2 FABH_ECOLI
5 PsiBlast_PDB 76.7539%-122 - C1 -1HNJ 7.3 FABH_ECOLI
13 PsiBlast_PDB 76.6737%-127 - C1 -4YLT - FABH_YERPE -
24 PsiBlast_CBE 76.3639%-122 - C1 -1HN9 - FABH_ECOLI -
22 PsiBlast_CBE 76.1439%-122 - C1 -2GYO - FABH_ECOLI -
72 HHSearch 75.5940%-117 - C1 -1HNJ 7.4 FABH_ECOLI
14 PsiBlast_PDB 75.4837%-126 - C1 -4Z19 - FABH_YERPE -
10 PsiBlast_PDB 75.1639%-122 - C1 -1EBL 2.9 FABH_ECOLI
23 PsiBlast_CBE 75.0639%-124 - C1 -2EFT - FABH_ECOLI -
3 PsiBlast_PDB 75.0539%-121 - C1 -1HN9 - FABH_ECOLI -
11 PsiBlast_PDB 73.9135%-121 - C1 -2EBD - FABH_AQUAE -
98 Fugue 72.9839%-117 - C1 -1HNJ 7.3 FABH_ECOLI