@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1013: (2016-01-26 )
MEKREELYRGKAKSVYQTDDADRLILLFRNDTSAFDGKRIEQLDRKGAVNNKFNAFIMQKLEAAGIPTQFDKLLSDTECLVKKLDMIPVECVVRNFAAGSLVRRLGVEEGIALTPPTFELFLKNDALGDPFINESHVQAFGWATPEQLAQMKTYSFKVNEVLNKLFDDAGLLLVDFKLEFGLFHGQIVLGDEFSPDGCRLWDKETRKKMDKDRFRQGLGDVIEAYEEVAKRLGVPL

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_8(3NUA)
PUR7_CLOP1
[Raw transfer]



C5P_A_2(4O7Y)
PUR7_PYRHO
[Raw transfer]



AIR_A_3(4FE2)
PUR7_STRPN
[Raw transfer]



TYD_A_2(4O7S)
PUR7_PYRHO
[Raw transfer]



U5P_A_2(4O7R)
PUR7_PYRHO
[Raw transfer]



ATP_A_7(2Z02)
PUR7_METJA
[Raw transfer]



EDO_A_7(3KRE)
PUR7_EHRCR
[Raw transfer]



ATP_A_7(2Z02)
PUR7_METJA
[Raw transfer]



EDO_A_7(3KRE)
PUR7_EHRCR
[Raw transfer]



MRD_A_3(3R9R)
PUR7_MYCA9
[Raw transfer]



ADP_B_11(2GQS)
PUR7_ECOLI
[Raw transfer]



ADP_A_5(2GQR)
PUR7_ECOLI
[Raw transfer]



ADP_A_9(2GQS)
PUR7_ECOLI
[Raw transfer]



ADP_A_5(2GQR)
PUR7_ECOLI
[Raw transfer]



ATP_B_6(2Z02)
PUR7_METJA
[Raw transfer]



EDO_A_4(3KRE)
PUR7_EHRCR
[Raw transfer]



ATP_A_3(4O7W)
PUR7_PYRHO
[Raw transfer]



ADP_A_2(4O7L)
PUR7_PYRHO
[Raw transfer]



ADP_A_4(4NYE)
PUR7_STRPN
[Raw transfer]



ADP_A_4(4FGR)
PUR7_STRPN
[Raw transfer]



ADP_A_3(4O7V)
PUR7_PYRHO
[Raw transfer]



ADP_A_4(2YZL)
PUR7_METJA
[Raw transfer]



ADP_A_3(3NUA)
PUR7_CLOP1
[Raw transfer]



ADP_A_3(3NUA)
PUR7_CLOP1
[Raw transfer]



ADP_A_5(4O7N)
PUR7_PYRHO
[Raw transfer]



ADP_A_3(4O7T)
PUR7_PYRHO
[Raw transfer]



ADP_A_8(4O86)
PUR7_PYRHO
[Raw transfer]



ADP_B_12(4FE2)
PUR7_STRPN
[Raw transfer]
34 HHSearch 99.1773% -75 - C2 -2GQR 8.1 PUR7_ECOLI
43 Fugue 98.8172% -72 - C2 -2GQS - PUR7_ECOLI -
1 PsiBlast_PDB 98.8172% -72 - C2 -2GQS 8.0 PUR7_ECOLI
2 PsiBlast_PDB 98.3471% -75 - C2 -2GQR 8.1 PUR7_ECOLI
21 PsiBlast_CBE 97.6272% -76 - C2 -2GQS 8.2 PUR7_ECOLI
9 PsiBlast_PDB 89.1646% -72 - C2 -2YZL 6.1 PUR7_METJA
27 PsiBlast_CBE 87.9546% -74 - C2 -2Z02 6.2 PUR7_METJA
38 HHSearch 87.8145% -67 - C2 -2YWV - ? -
33 HHSearch 87.4346% -75 - C2 -3NUA 8.2 PUR7_CLOP1
10 PsiBlast_PDB 87.3946% -75 - C2 -2Z02 6.0 PUR7_METJA
22 PsiBlast_CBE 87.3346% -77 - C2 -3NUA 6.4 PUR7_CLOP1
35 HHSearch 87.1446% -73 - C2 -2Z02 6.0 PUR7_METJA
3 PsiBlast_PDB 86.5546% -79 - C2 -3NUA 8.2 PUR7_CLOP1
8 PsiBlast_PDB 86.5444% -65 - C2 -2YWV - ? -
25 PsiBlast_CBE 86.2347% -74 - C2 -4FE2 5.8 PUR7_STRPN
26 PsiBlast_CBE 86.0444% -64 - C2 -2YWV - ? -
5 PsiBlast_PDB 85.7747% -75 - C2 -4FE2 4.9 PUR7_STRPN
23 PsiBlast_CBE 85.7347% -73 - C2 -4NYE - PUR7_STRPN -
6 PsiBlast_PDB 85.3947% -75 - C2 -4FGR 5.0 PUR7_STRPN
36 HHSearch 85.3544% -77 - C2 -3KRE 3.2 PUR7_EHRCR
7 PsiBlast_PDB 85.2747% -75 - C2 -4NYE 5.1 PUR7_STRPN
12 PsiBlast_PDB 85.2644% -70 - C2 -4O7L 6.1 PUR7_PYRHO
18 PsiBlast_PDB 85.2144% -71 - C2 -4O7W 6.5 PUR7_PYRHO
4 PsiBlast_PDB 85.1243% -76 - C2 -3KRE 3.2 PUR7_EHRCR
13 PsiBlast_PDB 84.7044% -70 - C2 -4O7N 6.4 PUR7_PYRHO
19 PsiBlast_PDB 84.4544% -72 - C2 -4O7Y 5.6 PUR7_PYRHO
17 PsiBlast_PDB 84.2844% -71 - C2 -4O7V 5.2 PUR7_PYRHO
16 PsiBlast_PDB 83.7044% -76 - C2 -4O7T 4.0 PUR7_PYRHO
20 PsiBlast_PDB 83.6444% -77 - C2 -4O86 4.6 PUR7_PYRHO
14 PsiBlast_PDB 83.4344% -68 - C2 -4O7R 5.6 PUR7_PYRHO
15 PsiBlast_PDB 82.9344% -80 - C2 -4O7S 6.3 PUR7_PYRHO