@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1195: (2016-01-27 )
MFKHIIARTPARSLVDGLTSSHLGKPDYAKALEQHNAYIRALQTCDVDITLLPPDERFPDSVFVEDPVLCTSRCAIITRPGAESRRGETEIIEETVQRFYPGKVERIEAPGTVEAGDIMMVGDHFYIGESARTNAEGARQMIAILEKHGLSGSVVRLEKVLHLKTGLAYLEHNNLLAAGEFVSKPEFQDFNIIEIPEEESYAANCIWVNERVIMPAGYPRTREKIARLGYRVIEVDTSEYRKIDGGVSCMSLRF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SMZ_B_4(3BPB)
DDAH_PSEAE
[Raw transfer]



SMZ_A_3(3BPB)
DDAH_PSEAE
[Raw transfer]



CIR_A_2(1H70)
DDAH_PSEAE
[Raw transfer]



CIR_A_2(1H70)
DDAH_PSEAE
[Raw transfer]



CIR_A_2(2C6Z)
DDAH1_BOVIN
[Raw transfer]



D20_A_3(2JAJ)
DDAH1_HUMAN
[Raw transfer]



LN5_A_3(3I4A)
DDAH1_HUMAN
[Raw transfer]



LN7_A_3(3P8E)
DDAH1_HUMAN
[Raw transfer]



HM3_A_3(3RHY)
DDAH_PSEAE
[Raw transfer]



GLY_A_2(2CI7)
DDAH1_BOVIN
[Raw transfer]



LN6_A_3(3P8P)
DDAH1_HUMAN
[Raw transfer]



HM3_B_4(3RHY)
DDAH_PSEAE
[Raw transfer]



HCS_A_3(2CI5)
DDAH1_BOVIN
[Raw transfer]
21 HHSearch 98.63100%-106 - C3 -1H70 3.1 DDAH_PSEAE
2 PsiBlast_PDB 98.4399%-106 - C3 -1H70 3.1 DDAH_PSEAE
36 Fugue 98.4299%-106 - C3 -1H70 - DDAH_PSEAE -
19 PsiBlast_CBE 97.86100%-114 - C3 -3RHY 2.9 DDAH_PSEAE
20 PsiBlast_CBE 97.6199%-107 - C3 -3BPB 3.4 DDAH_PSEAE
1 PsiBlast_PDB 97.53100%-111 - C3 -3RHY 3.1 DDAH_PSEAE
3 PsiBlast_PDB 97.1699%-107 - C3 -3BPB 2.8 DDAH_PSEAE
4 PsiBlast_PDB 70.1929% -92 - C3 -2C6Z 4.2 DDAH1_BOVIN
7 PsiBlast_PDB 69.9829% -91 - C3 -2CI5 3.4 DDAH1_BOVIN
9 PsiBlast_PDB 69.6429% -90 - C3 -2CI7 2.5 DDAH1_BOVIN
8 PsiBlast_PDB 69.4829% -94 - C3 -2CI6 - DDAH1_BOVIN -
5 PsiBlast_PDB 69.4829% -92 - C3 -2CI3 - DDAH1_BOVIN -
6 PsiBlast_PDB 69.3829% -90 - C3 -2CI4 - DDAH1_BOVIN -
12 PsiBlast_PDB 68.7430% -76 - C3 -3I4A 3.5 DDAH1_HUMAN
13 PsiBlast_PDB 68.0630% -78 - C3 -3P8E 3.5 DDAH1_HUMAN
14 PsiBlast_PDB 67.8829% -91 - C3 -3P8P 3.8 DDAH1_HUMAN
11 PsiBlast_PDB 67.6530% -74 - C3 -3I2E - DDAH1_HUMAN -
10 PsiBlast_PDB 67.5830% -81 - C3 -2JAJ 3.6 DDAH1_HUMAN
23 HHSearch 67.4228% -72 * C3 *3I4A - DDAH1_HUMAN -
27 HHSearch 64.6618% -87 - C3 -1JDW - GATM_HUMAN -