@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1246: (2016-01-27 )
MARLGSSVTNEIKQALAASRGALRSVAAFSGVINLLMLVPSLYMLQVYDRVLSSANEVTLLMLTLMALGVFVFMGALEALRSFVLVRVSERFDGQLHGRIYAAAFERNLRAGGQEASQALHDLTTLRQFITGQALFAFFDAPWFPVYLLVIFLFDPWLGLLSLVGALALMALAWFNERATRAPLAKAGELSIKSGQLASNNLRNAEVIEAMGMLGSMRGRWERLHQAFLDQQSLASERAARINALSKYLRIALQSLVLGLGAWLAVEGRITPGMMIAGSILMGRALGPIDQLIGVWKQWGAARDAYRRLSGLLDEFPARERRMELPEPRGHLLLESLDAAPPGSEARTLRGLTLAIPAGSVVGVIGPSGSGKSSLARVVLGIWPTLHGSVRLDGAEIRQYERETLGPRIGYLPQDIELFAGTVAENIARFGEVQADKVVEAARLAGVHELVLRLPQGYDTVLGVGGAGLSGGQRQRIALARALYGAPTLVVLDEPNSNLDDSGEQALLAAIQALKARGCTVLLITHRAGVLGCADRLLALNAGQLHLYGERDQVLAALNNQRAASASQQRADYRVAGYGAPQVVAAPRQGGVE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]
3 PsiBlast_PDB 83.2125%-110 - C2 -2HYD - Y1866_STAAM -
4 PsiBlast_PDB 82.7725%-107 - C2 -2ONJ - Y1866_STAAM -
103 HHSearch 79.8324%-110 - C2 -3ZDQ - ABCBA_HUMAN -
104 HHSearch 78.7322%-112 - C2 -3WMG - ? -
122 Fugue 77.5022% -91 * C1 *3B60 - MSBA_SALTY -
101 HHSearch 76.0622% -93 - C1 -3B60 - MSBA_SALTY -
1 PsiBlast_PDB 73.9825%-106 - C2 -4RY2 - ? -
2 PsiBlast_PDB 73.1925% -97 - C2 -4S0F - ? -
5 PsiBlast_PDB 72.6125%-108 - C2 -4A82 - Y1866_STAAM -
128 Fugue 69.1420% -99 - C1 -4F4C - PGP1_CAEEL -
13 PsiBlast_PDB 61.2832%-103 - C2 -4Q4J - Y288_THEMA -
11 PsiBlast_PDB 61.0032%-111 - C2 -4Q4A - Y288_THEMA -
12 PsiBlast_PDB 60.7432%-107 - C2 -4Q4H - Y288_THEMA -
10 PsiBlast_PDB 60.4932%-109 - C2 -3QF4 - Y288_THEMA -
16 PsiBlast_PDB 59.3636%-111 - C2 -4AYX 4.8 ABCBA_HUMAN
36 PsiBlast_CBE 58.2635%-112 - C2 -4AYW 5.2 ABCBA_HUMAN
17 PsiBlast_PDB 58.1836%-109 - C2 -3ZDQ - ABCBA_HUMAN -
6 PsiBlast_PDB 58.1727% 3 - C- -3B5X - MSBA_VIBCH -
15 PsiBlast_PDB 57.0536%-102 - C2 -4AYT 5.5 ABCBA_HUMAN
30 PsiBlast_CBE 57.0031%-101 - C2 -4Q4A - ? -