@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1384: (2016-01-28 )
MRVLVTGGAGFIGSHVLVELLGQGAKVVVLDNLVNGSSESLKRVERITGHPVGFVLGDVRDSLLVERLLIDEKVDAVIHLAGLKAVGESVDDPLEYYESNVQGTISLLRAMQRVGVFKIVFSSSATIYQMPGTLPISESSKVGGVASPYGRTKLTAEHMLDDLARSDTRWSIAVLRYFNPIGAHESGLIGEDPCGTPNNLLPYIAQVAVGRLSRLTVHGGDYPTIDGTGVRDYIHVCDLAAGHTRALEYLGQGHGYHVWNLGTGTGYSVLQVIEAFERVSGRRIPFTVSGRRPGDVAECWADVSKAERELGWKAGLGLECMIADAWRWQVSNPSGYS

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GUD_B_6(3ENK)
?
[Raw transfer]




NAD_C_3(1EK5)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1UDB)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1UDA)
GALE_ECOLI
[Raw transfer]




NAD_A_7(1HZJ)
GALE_HUMAN
[Raw transfer]




NAD_C_16(4LIS)
?
[Raw transfer]




NAD_A_5(4LIS)
?
[Raw transfer]




NAD_A_3(1KVT)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]




NAD_A_6(1KVR)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1UDC)
GALE_ECOLI
[Raw transfer]




NAD_B_10(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1KVU)
GALE_ECOLI
[Raw transfer]




NAI_B_7(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]




NAD_A_4(1KVQ)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1UDB)
GALE_ECOLI
[Raw transfer]




NAD_A_6(1A9Y)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRJ)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1XEL)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1A9Z)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRL)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1KVS)
GALE_ECOLI
[Raw transfer]




GUD_A_4(3ENK)
?
[Raw transfer]




NAD_A_3(3ENK)
?
[Raw transfer]




GDU_B_4(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_A_4(1LRK)
GALE_ECOLI
[Raw transfer]




NAD_B_6(2UDP)
GALE_ECOLI
[Raw transfer]




NAD_B_10(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_A_4(2UDP)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1NAI)
GALE_ECOLI
[Raw transfer]




NAI_A_5(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_A_8(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_A_8(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_A_9(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_B_10(1I3M)
GALE_HUMAN
[Raw transfer]




NAD_A_4(1NAH)
GALE_ECOLI
[Raw transfer]




NAI_A_5(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_B_11(4LIS)
?
[Raw transfer]




NAD_B_5(3ENK)
?
[Raw transfer]




NAD_B_10(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_A_8(1I3M)
GALE_HUMAN
[Raw transfer]




NAD_A_3(3ENK)
?
[Raw transfer]




NAD_B_9(1HZJ)
GALE_HUMAN
[Raw transfer]




GDU_A_3(1I3L)
GALE_HUMAN
[Raw transfer]




EDO_A_10(1UDC)
GALE_ECOLI
[Raw transfer]




EDO_A_8(1UDC)
GALE_ECOLI
[Raw transfer]




2 PsiBlast_PDB 98.4055%-111 - C1 -1EK5 10.6 GALE_HUMAN
3 PsiBlast_PDB 97.8855%-111 - C1 -1EK6 12.6 GALE_HUMAN
25 PsiBlast_CBE 97.5254%-111 - C1 -1I3L 12.6 GALE_HUMAN
6 PsiBlast_PDB 96.5954%-109 - C1 -1I3M 12.4 GALE_HUMAN
71 HHSearch 96.3256%-109 - C1 -1EK6 12.6 GALE_HUMAN
8 PsiBlast_PDB 96.1053%-112 - C1 -1LRK 13.0 GALE_ECOLI
4 PsiBlast_PDB 96.0454%-110 - C1 -1I3K 12.3 GALE_HUMAN
5 PsiBlast_PDB 95.8354%-110 - C1 -1I3L 12.4 GALE_HUMAN
23 PsiBlast_CBE 95.6854%-108 - C1 -1I3N 12.5 GALE_HUMAN
7 PsiBlast_PDB 95.6754%-109 - C1 -1I3N 12.6 GALE_HUMAN
26 PsiBlast_CBE 94.8854%-110 - C1 -1I3K 12.7 GALE_HUMAN
22 PsiBlast_CBE 94.4755%-109 - C1 -1EK6 12.1 GALE_HUMAN
1 PsiBlast_PDB 94.2455%-107 - C1 -1HZJ 12.8 GALE_HUMAN
72 HHSearch 94.0956%-111 - C1 -3ENK 12.6 ?
9 PsiBlast_PDB 93.9853%-109 - C1 -1LRL 11.9 GALE_ECOLI
12 PsiBlast_PDB 93.5753%-106 - C1 -1UDC 12.6 GALE_ECOLI
24 PsiBlast_CBE 93.3654%-107 - C1 -1I3M 12.1 GALE_HUMAN
19 PsiBlast_PDB 93.3052%-110 - C1 -1KVS 11.6 GALE_ECOLI
21 PsiBlast_CBE 93.1755%-107 - C1 -1HZJ 11.2 GALE_HUMAN
18 PsiBlast_PDB 93.1553%-107 - C1 -1XEL 12.6 GALE_ECOLI
13 PsiBlast_PDB 92.4553%-108 - C1 -1LRJ 11.6 GALE_ECOLI
30 PsiBlast_CBE 92.3652%-107 - C1 -1KVQ 11.9 GALE_ECOLI
10 PsiBlast_PDB 92.1855%-111 - C1 -3ENK 12.6 ?
31 PsiBlast_CBE 91.7652%-108 - C1 -1A9Y 12.1 GALE_ECOLI
14 PsiBlast_PDB 91.6153%-106 - C1 -1NAH 12.5 GALE_ECOLI
32 PsiBlast_CBE 91.5852%-107 - C1 -1A9Z 12.0 GALE_ECOLI
17 PsiBlast_PDB 91.5253%-104 - C1 -1UDB 12.7 GALE_ECOLI
29 PsiBlast_CBE 91.4952%-105 - C1 -1KVU 12.1 GALE_ECOLI
33 PsiBlast_CBE 91.4152%-106 - C1 -1KVT 11.9 GALE_ECOLI
73 HHSearch 91.3253%-103 - C1 -1UDB 12.7 GALE_ECOLI
15 PsiBlast_PDB 91.0753%-108 - C1 -1NAI 12.3 GALE_ECOLI
16 PsiBlast_PDB 91.0153%-104 - C1 -1UDA 12.9 GALE_ECOLI
28 PsiBlast_CBE 90.9553%-105 - C1 -2UDP 12.2 GALE_ECOLI
27 PsiBlast_CBE 90.9055%-111 - C1 -3ENK 12.7 ?
11 PsiBlast_PDB 90.5553%-106 - C1 -2UDP 12.9 GALE_ECOLI
20 PsiBlast_PDB 89.8952%-104 - C1 -1KVR 12.3 GALE_ECOLI
92 Fugue 87.5651%-108 - C1 -1Z45 12.5 GAL10_YEAST
35 PsiBlast_CBE 85.2647%-107 * C1 *4LIS 12.2 ?
37 PsiBlast_CBE 84.8847%-108 - C1 -4LIS 11.7 ?
34 PsiBlast_CBE 84.8750%-111 - C1 -1Z45 12.5 GAL10_YEAST
36 PsiBlast_CBE 83.6047%-108 - C1 -4LIS 12.1 ?