Study : PA1470 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

Download fasta file
Download text file


Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: NAP_B_6(4DMM) / Model_54(4DMM/B) = [9.6] Download1347.4720.97MPDITQAAIVTGASRGIGRAIARRLAADGFAVAVNYASNQAMADEVVAEIVAAGGAAIAVQGDVASAEDMDKLFEATRGAFGRIDVVVNSAGTMPYLKIADGDLEGFDRVIRTNLRGAFIVLGLAARHVERGGRIIALSTSVIARALPSYGPYIASKSGVEGLVHVLANELRGQDIRVNAVAPGPVATELFFNGKSAEQIDQIARLAPLERLGEPDEIAAAVSFLAGPDGAWVNSQVLRVNGGFA
Complex: NDP_A_3(3SJ7) / Model_18(3SJ7/A) = [10.1] Download1416.2219.36MPDITQAAIVTGASRGIGRAIARRLAADGFAVAVNYASNQAMADEVVAEIVAAGGAAIAVQGDVASAEDMDKLFEATRGAFGRIDVVVNSAGTMPYLKIADGDLEGFDRVIRTNLRGAFIVLGLAARHVERGGRIIALSTSVIARALPSYGPYIASKSGVEGLVHVLANELRGQDIRVNAVAPGPVATELFFNGKSAEQIDQIARLAPLERLGEPDEIAAAVSFLAGPDGAWVNSQVLRVNGGFA
Complex: NAP_D_8(4DMM) / Model_52(4DMM/D) = [11.1] Download1576.8922.08MPDITQAAIVTGASRGIGRAIARRLAADGFAVAVNYASNQAMADEVVAEIVAAGGAAIAVQGDVASAEDMDKLFEATRGAFGRIDVVVNSAGTMPYLKIADGDLEGFDRVIRTNLRGAFIVLGLAARHVERGGRIIALSTSVIARALPSYGPYIASKSGVEGLVHVLANELRGQDIRVNAVAPGPVATELFFNGKSAEQIDQIARLAPLERLGEPDEIAAAVSFLAGPDGAWVNSQVLRVNGGFA
Complex: NAP_C_7(4DMM) / Model_53(4DMM/C) = [11.3] Download1285.5120.62MPDITQAAIVTGASRGIGRAIARRLAADGFAVAVNYASNQAMADEVVAEIVAAGGAAIAVQGDVASAEDMDKLFEATRGAFGRIDVVVNSAGTMPYLKIADGDLEGFDRVIRTNLRGAFIVLGLAARHVERGGRIIALSTSVIARALPSYGPYIASKSGVEGLVHVLANELRGQDIRVNAVAPGPVATELFFNGKSAEQIDQIARLAPLERLGEPDEIAAAVSFLAGPDGAWVNSQVLRVNGGFA
Complex: NDP_B_6(3SJ7) / Model_50(3SJ7/B) = [11.8] Download1588.4517.11MPDITQAAIVTGASRGIGRAIARRLAADGFAVAVNYASNQAMADEVVAEIVAAGGAAIAVQGDVASAEDMDKLFEATRGAFGRIDVVVNSAGTMPYLKIADGDLEGFDRVIRTNLRGAFIVLGLAARHVERGGRIIALSTSVIARALPSYGPYIASKSGVEGLVHVLANELRGQDIRVNAVAPGPVATELFFNGKSAEQIDQIARLAPLERLGEPDEIAAAVSFLAGPDGAWVNSQVLRVNGGFA
Consensus
[pKd Mean = 10.78]
-1442
(s=121)
20
(s=1)
MPDITQAAIVTGASRGIGRAIARRLAADGFAVAVNYASNQAMADEVVAEIVAAGGAAIAVQGDVASAEDMDKLFEATRGAFGRIDVVVNSAGTMPYLKIADGDLEGFDRVIRTNLRGAFIVLGLAARHVERGGRIIALSTSVIARALPSYGPYIASKSGVEGLVHVLANELRGQDIRVNAVAPGPVATELFFNGKSAEQIDQIARLAPLERLGEPDEIAAAVSFLAGPDGAWVNSQVLRVNGGFA