@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1583: (2016-01-30 )
MASIRTLSFDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTETGRIYQRPFGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKNGTSFLNEWYAVDLVKNQDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEVLAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPIPVIPTCHYMMGGVATNIHGQAITQDANGNDQIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEKALKEGIDARGASESDLEASFKRLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCHTLYFPGEKRVSKRSVNFAPKTVPAFEPKVRTY

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_5(3AEE)
SDHA_PIG
[Raw transfer]



FAD_A_5(3AE4)
SDHA_PIG
[Raw transfer]



3NP_A_10(1ZP0)
SDHA_PIG
[Raw transfer]



FAD_A_5(3AE2)
SDHA_PIG
[Raw transfer]



FAD_A_5(3AEF)
SDHA_PIG
[Raw transfer]



FAD_A_6(2H89)
SDHA_CHICK
[Raw transfer]



FUM_A_15(1JRX)
FRDA_SHEFR
[Raw transfer]



FAD_A_5(3AE6)
SDHA_PIG
[Raw transfer]



FAD_A_5(3ABV)
SDHA_PIG
[Raw transfer]



FAD_A_5(3AEB)
SDHA_PIG
[Raw transfer]



FAD_A_5(3SFE)
SDHA_PIG
[Raw transfer]



TEO_A_7(1QJD)
FRDA_SHEFR
[Raw transfer]



FAD_A_5(3AE3)
SDHA_PIG
[Raw transfer]



FAD_A_6(2ACZ)
SDHA_ECOLI
[Raw transfer]



FAD_A_5(3AE5)
SDHA_PIG
[Raw transfer]



FAD_A_6(1YQ4)
SDHA_CHICK
[Raw transfer]



FAD_A_8(1NEN)
SDHA_ECOLI
[Raw transfer]



FAD_A_5(3AEC)
SDHA_PIG
[Raw transfer]



FAD_A_6(1YQ3)
SDHA_CHICK
[Raw transfer]



FAD_A_5(3AE8)
SDHA_PIG
[Raw transfer]



FAD_A_5(1ZOY)
SDHA_PIG
[Raw transfer]



FAD_A_5(3SFD)
SDHA_PIG
[Raw transfer]



FAD_A_5(3AED)
SDHA_PIG
[Raw transfer]



FAD_A_5(3AEA)
SDHA_PIG
[Raw transfer]



FAD_A_5(1ZP0)
SDHA_PIG
[Raw transfer]



FAD_A_5(3AEG)
SDHA_PIG
[Raw transfer]



FAD_A_5(3AE7)
SDHA_PIG
[Raw transfer]



FAD_A_8(1NEK)
SDHA_ECOLI
[Raw transfer]



FAD_A_5(3AE9)
SDHA_PIG
[Raw transfer]



FAD_A_5(3AE1)
SDHA_PIG
[Raw transfer]



FAD_A_5(4YTP)
?
[Raw transfer]



3NP_A_11(1YQ4)
SDHA_CHICK
[Raw transfer]
5 PsiBlast_PDB 92.7070% -84 - C1 -2WDV - SDHA_ECOLI -
111 HHSearch 92.3170% -83 - C1 -2WDQ - SDHA_ECOLI -
29 PsiBlast_CBE 92.1470% -84 - C1 -2WDV - SDHA_ECOLI -
10 PsiBlast_PDB 92.1370% -81 - C1 -2WU5 - SDHA_ECOLI -
9 PsiBlast_PDB 91.9970% -83 - C1 -2WU2 - SDHA_ECOLI -
30 PsiBlast_CBE 91.8270% -83 - C1 -2WDV - SDHA_ECOLI -
28 PsiBlast_CBE 91.7470% -83 - C1 -2WP9 - SDHA_ECOLI -
21 PsiBlast_CBE 91.7470% -81 - C1 -2WU5 - SDHA_ECOLI -
22 PsiBlast_CBE 91.6770% -81 - C1 -2WU5 - SDHA_ECOLI -
7 PsiBlast_PDB 91.5670% -83 - C1 -2WP9 - SDHA_ECOLI -
8 PsiBlast_PDB 91.5570% -82 - C1 -2WS3 - SDHA_ECOLI -
33 PsiBlast_CBE 91.3570% -80 - C1 -2WDQ - SDHA_ECOLI -
27 PsiBlast_CBE 91.3570% -83 - C1 -2WP9 - SDHA_ECOLI -
23 PsiBlast_CBE 91.3070% -82 - C1 -2WU2 - SDHA_ECOLI -
26 PsiBlast_CBE 91.2770% -81 - C1 -2WS3 - SDHA_ECOLI -
25 PsiBlast_CBE 91.2470% -82 - C1 -2WS3 - SDHA_ECOLI -
32 PsiBlast_CBE 91.0970% -80 - C1 -2WDR - SDHA_ECOLI -
4 PsiBlast_PDB 91.0470% -81 - C1 -2WDQ - SDHA_ECOLI -
34 PsiBlast_CBE 91.0170% -81 - C1 -2WDQ - SDHA_ECOLI -
24 PsiBlast_CBE 90.9770% -81 - C1 -2WU2 - SDHA_ECOLI -
3 PsiBlast_PDB 88.9970% -79 - C1 -2ACZ 11.3 SDHA_ECOLI
2 PsiBlast_PDB 88.8570% -80 - C1 -1NEN 11.8 SDHA_ECOLI
1 PsiBlast_PDB 88.3470% -78 - C1 -1NEK 11.7 SDHA_ECOLI
76 PsiBlast_CBE 80.9851% -73 - C1 -1YQ4 10.1 SDHA_CHICK
54 PsiBlast_CBE 80.9751% -77 - C1 -3AEC 8.4 SDHA_PIG
77 PsiBlast_CBE 80.6751% -74 - C1 -1YQ3 10.7 SDHA_CHICK
57 PsiBlast_CBE 80.6251% -73 - C1 -3AE9 10.7 SDHA_PIG
55 PsiBlast_CBE 80.5051% -73 - C1 -3AEB 10.6 SDHA_PIG
53 PsiBlast_CBE 80.3251% -75 - C1 -3AED 9.5 SDHA_PIG
65 PsiBlast_CBE 80.1651% -75 - C1 -3AE1 10.5 SDHA_PIG
56 PsiBlast_CBE 80.0751% -74 - C1 -3AEA 9.8 SDHA_PIG
64 PsiBlast_CBE 80.0251% -74 - C1 -3AE2 11.1 SDHA_PIG
50 PsiBlast_CBE 80.0051% -75 - C1 -3AEG 11.1 SDHA_PIG
47 PsiBlast_CBE 79.9951% -74 - C1 -4YTP 11.5 ?
71 PsiBlast_CBE 79.9851% -73 - C1 -2H89 10.9 SDHA_CHICK
58 PsiBlast_CBE 79.8051% -75 - C1 -3AE8 9.4 SDHA_PIG
59 PsiBlast_CBE 79.7351% -73 - C1 -3AE7 9.1 SDHA_PIG
66 PsiBlast_CBE 79.6651% -75 - C1 -3ABV 10.1 SDHA_PIG
62 PsiBlast_CBE 79.6651% -73 - C1 -3AE4 9.6 SDHA_PIG
61 PsiBlast_CBE 79.6651% -73 - C1 -3AE5 9.7 SDHA_PIG
60 PsiBlast_CBE 79.6551% -74 - C1 -3AE6 9.3 SDHA_PIG
49 PsiBlast_CBE 79.5551% -74 - C1 -3SFD 10.9 SDHA_PIG
63 PsiBlast_CBE 79.3451% -73 - C1 -3AE3 9.1 SDHA_PIG
48 PsiBlast_CBE 79.3151% -74 - C1 -3SFE 11.2 SDHA_PIG
52 PsiBlast_CBE 79.2451% -74 - C1 -3AEE 10.1 SDHA_PIG
51 PsiBlast_CBE 79.0151% -69 - C1 -3AEF 10.3 SDHA_PIG
67 PsiBlast_CBE 78.3051% -71 - C1 -1ZP0 10.7 SDHA_PIG
68 PsiBlast_CBE 78.0551% -71 - C1 -1ZOY 9.6 SDHA_PIG